Sinorhizobium garamanticum: PZN02_002163
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Entry
PZN02_002163 CDS
T09001
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
egi
Sinorhizobium garamanticum
Pathway
egi01501
beta-Lactam resistance
egi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PZN02_002163
01503 Cationic antimicrobial peptide (CAMP) resistance
PZN02_002163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_002163
01504 Antimicrobial resistance genes [BR:
egi01504
]
PZN02_002163
Transporters [BR:
egi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PZN02_002163
Antimicrobial resistance genes [BR:
egi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PZN02_002163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ZT_dimer
SecD_SecF_C
DUF222
Orf78
Motif
Other DBs
NCBI-ProteinID:
WEX85921
LinkDB
All DBs
Position
1:complement(2329395..2332709)
Genome browser
AA seq
1104 aa
AA seq
DB search
MNFSAWSIRNPVAPILAFFVLVVLGWQSFNSLPITRFPNIDVPIVQIAVTQSGAAPAELE
TQVTKEIEDAVAGVSGVDHIQSTITDGSSTTAVIFRMEVPTTQAVQDVKDAIDRIRSDLP
TSIEEPIVSKVDVEGQAIQTFAVSSPGMTLEELSWFVDDTIKRAIQGKSGIGRVDRYGGS
DREVRIELNEDRLNSFGITAADVNSQLRRMNMDLGSGRGQVGGSEQAIRTLGDTRDVAEL
SNTMISLPNGRFVRLSKLGTVTDTYEEPKSFARFNGNPGVTFAVFRSKGASEVTVAETVA
KTLDEIRAKNPDVTIEMVDDSVYFTYGNYEAAIHTLIEGALLAVLVVMLFLRNWRATLIS
AVALPLSAIPTFWVMELLGFSLNLVSFLAMTLATGILVDDAIVEIENIERHIRMGKSPYK
ASIEAADEIGLAVIATTFTIIAVFVPVSFMPGIPGQYFIQFGLTVAVSVFFSLLVARLIT
PVMAAYLMKPTDVGGGHYNGDGFMMRQYSRVVRFTTKRWYTRYATLLAAILLSIGSVFAL
IVFVPGSFLPPEDNSRVSLSIELPPDAMLEDTDRTTTEIYNRIKDIDGVENVFVLGGASP
KGDLELRRAAVTVLLKKLDHSLVNKVVNDVMGRTPLIGKYLPKLPPAGRIKPQSEIEREI
FAKLRSIPDVRVTKLNDRGERDLSFNLLSNNDADLDTAVATLEAKLRSDPLLANVSPDGA
LPRPELQIRPRADQMSRLGITTQQISEVIRVATIGDIDAQLTKIALDGRLIPIRVQLNRD
FRTDLAAIRNLKVQTASGATVPLSSVADINYSEGPSSIKRYDRNRVVALGADLPIGVALN
TASDRFKQIAAEAKLPGTVEFLESGDAEVQAEMQQSFGNAMLLGLMMVLVVLILLFKDVI
QPFTILFSLPLAIGGVAAGLILTQNALSMPVLIGILMLMGIVTKNAILLVDFGIEMMHHG
MDRTMSMIEAGRKRARPIVMTSIAMSAGMLPSALGVGEGGSFRAPMAIAVIGGIIVSTIL
SLVVVPSFFLIMDDLSRLLARIFGRFVGKKEEEDLPLDRETLTQLAAEQGGTLEELQERI
KALEEQRDDKSDRKVINHPALAAE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcagcctggtccatccgcaatccggtcgcgccgattctggccttcttcgtg
ctggtcgtgctcggctggcagtcgttcaattcgctgccgatcacccgcttcccgaacatc
gacgtgccgatcgtacagatcgccgtcacgcagagcggcgccgcccccgctgaactcgaa
acccaggtcaccaaggagatcgaggacgcggtcgccggcgtctccggcgtcgaccacatc
cagtcgacgatcaccgacggcagttcaaccaccgccgtcatcttccgcatggaggtgccg
acgactcaagccgtgcaggacgtcaaggacgcgatcgaccgcatccgcagcgacctgccg
acctcgatagaggagccgatcgtctccaaggtcgacgtcgaaggccaggcgatccaaact
ttcgccgtctcctcccccggcatgacgctcgaggagctctcctggttcgtggatgacacg
atcaagcgtgcgatccagggcaagagcggcatcggccgtgtcgaccgctatggcggctcc
gaccgcgaggtccgcatcgagctcaatgaagaccgactgaactccttcggcatcaccgcc
gccgatgtcaacagccagcttcgccggatgaacatggatctcggttccgggcgcggccag
gtcggcggcagcgaacaggcgatccgcacgctcggcgacacgcgcgacgtggccgagctt
tccaatacgatgatttcgctcccgaacggtcgcttcgtgcgcctgtcgaaactcggcacg
gtgaccgacacctacgaggagccgaagtcgtttgcccgctttaacggcaacccgggcgtc
accttcgcggtcttccgctccaagggcgccagcgaagtgaccgtcgccgaaacggtcgcc
aagacgctcgacgaaatccgggcgaagaatccggatgtcactatcgagatggtggacgat
tcggtctactttacctacggcaactacgaggccgccattcacacgctgatcgaaggcgcc
ctgctcgccgttctcgtcgtgatgctgttcctgcgcaactggcgcgcaaccctaatctcg
gcggtcgcgttgccgctctctgcgattccaaccttctgggtgatggagctcctcggcttc
tcgctgaacctcgtcagcttcctcgcgatgacgctcgcgaccggtatcctcgtcgatgat
gcgatcgtggagatcgagaacatcgagcggcatatccgcatgggcaagtcgccttacaag
gcctcgatcgaggcggcggacgaaatcggccttgcggtgatcgccaccaccttcaccatc
atcgccgtctttgtcccggtctccttcatgccgggcattccggggcagtacttcatccag
ttcggcctgacggtcgcggtctccgtcttcttttcgctgctcgtcgcccgcctgatcacg
ccggtgatggccgcctatctgatgaagccgacggatgtcggcggcggtcactacaatggc
gacggcttcatgatgcggcagtacagccgcgtcgtgcgcttcaccacgaaacgctggtac
acccgctatgccacactgcttgccgctatcctcctctcgatcggctccgttttcgcgctg
atcgtcttcgtgccaggcagcttcctgccgccggaggacaattcgcgcgtgagcctgtcg
atcgaattgccgccggatgcgatgctcgaggatacggatcgcacaacgaccgagatctac
aaccgcataaaggacatagacggcgtcgaaaacgtcttcgtgctcggcggcgcctcgccg
aagggcgatctcgaactgcggcgcgccgcagtcacggtgcttctcaagaagctcgatcac
tccctcgtcaacaaagtcgtcaacgacgtcatgggccgcacgccacttatcggcaagtat
cttccgaagctgccgccggcgggccgcatcaagccgcaatctgagatcgaaagggagata
ttcgcaaagctgcgctcgatccccgacgttcgcgtcaccaagctcaatgaccgtggcgag
cgcgatctatcgttcaacctgctttccaacaacgacgcagacctggacacggcggtcgcg
actctcgaagcgaagctgcgcagcgatcccctgctcgccaatgtcagccccgacggcgca
ttgccgcggccggaactgcagatccgtccgcgcgccgatcagatgtcccgcctcggcatc
accacgcagcagatctccgaggtgatccgcgtcgccacaatcggcgacatcgacgcgcaa
ctcaccaagatcgcgctcgacggccggctgatcccgatccgcgtccagctcaaccgcgat
ttccgcacggatctcgcggcaatccgcaacctcaaggtccagaccgcgtcgggggcgacc
gttccgctttcgagcgtcgcggacatcaactattcggagggtcccagctccatcaagcga
tacgatcgcaaccgcgtcgtggcgctcggtgccgacctgccgatcggcgtcgcgctcaac
accgcgtccgaccgcttcaagcagatcgcggccgaagccaagctgcccgggacggtggag
ttcctcgaaagcggcgacgccgaggtgcaggcagaaatgcagcagagcttcggcaacgcc
atgctgcttggcctgatgatggtgctggtggtgctcatcctcctgttcaaggacgtgatc
cagccgttcaccatcctgttctcgctgccgctcgcaatcggcggcgttgcggccgggctg
atcctgacccagaacgcgctttcgatgccggtgctgatcggtatcctcatgctgatgggt
atcgtcaccaagaacgcgatcctgctcgtggatttcggtatcgagatgatgcatcacggc
atggaccgcaccatgtcgatgatcgaagccggccgcaagcgtgcacgcccgatcgtcatg
acctcgatcgccatgtccgccggcatgctgccgtcggcgctcggcgtcggtgaaggcggc
tccttccgcgcgccgatggcgatcgcggtgatcggcggcatcatcgtctcgaccatcctc
agcctcgtcgtggttccctcattcttcctgatcatggacgacctttcgcggctgctcgcc
cgcatcttcggccgcttcgtcggcaagaaagaggaggaggacctgccgctcgaccgcgag
acactgacacagctcgccgccgaacagggcggcacgctcgaggaattgcaggagcgcatc
aaggcgctggaagagcagcgtgacgacaagtccgatcgcaaggtcatcaaccatcccgcg
cttgccgccgaataa
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