Sinorhizobium garamanticum: PZN02_002543
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Entry
PZN02_002543 CDS
T09001
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
egi
Sinorhizobium garamanticum
Pathway
egi01501
beta-Lactam resistance
egi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PZN02_002543
01503 Cationic antimicrobial peptide (CAMP) resistance
PZN02_002543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egi03036
]
PZN02_002543
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egi02000
]
PZN02_002543
01504 Antimicrobial resistance genes [BR:
egi01504
]
PZN02_002543
Chromosome and associated proteins [BR:
egi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PZN02_002543
Transporters [BR:
egi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PZN02_002543
Antimicrobial resistance genes [BR:
egi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PZN02_002543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
Beta-barrel_RND
Biotin_lipoyl
BSH_YknX
RND-MFP_C
BSH_CusB
Peptidase_M23
BMC
HH_EMRA
BSH_YhbJ
HH_YBHG
RnfC_N
T3SS_basalb_I
LEA_4
Motif
Other DBs
NCBI-ProteinID:
WEX86273
UniProt:
A0ABY8D8Q0
LinkDB
All DBs
Position
1:2743259..2744452
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AA seq
397 aa
AA seq
DB search
MRVWKQLAVSALVLVVGAAAWVRFAPGAGETLAAIGVSHPLIDALSKSQGGEGEGGRRNG
GRGQGGQGGFGDATLVVVRPSASAIVNDRLNAIGNGEAIHSVTVTPTATGNLTEILVKSG
ERIARGQVIARLDSDDQKVAAEQARLTRDSAQEKVQRYRNLSTARAVTAVEVRDAEIALQ
AAELALKTAELDLRRRDIVAPSKGVVGIITVNVGDYVTTSTPIVVVDDRSQILVDFWVPE
RFASKIFVDQPVTANAIAQPGRQLEGVIHAIDNRLDQASRTLRVRARLENPDDMLRAGMS
FSVTMAFDGDRYPTVDPLAIQWSSDGSYIWRVNGDRSERVPVKIIQRNPDKVLVDATLAE
GDRIVTEGVQRLRDGGAVRVAGENRPEPQQKVAGEAQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtttggaagcagctggcggtcagcgcccttgtgctcgtcgtgggggcggcagct
tgggtgcgttttgcgcccggcgcgggcgagacgctggcggcaatcggcgtttcacatccg
ctgatcgatgcactgtcgaagtcgcaggggggcgaaggtgaaggcgggcggcgcaatggc
gggcgcgggcagggtggccagggcggcttcggcgatgcgacgttggtcgtcgtcagaccg
tcggcaagcgcgatcgtcaacgacaggctcaacgccatcggcaacggcgaagcaatccac
tccgtgacggtgacgccgacggcgaccggcaacctcaccgagatcctggtaaaatccggc
gagaggatcgcccggggccaggtgatcgcccggctcgacagcgacgaccagaaggttgcg
gcagaacaggcgaggctcacgcgtgacagcgcgcaggaaaaggtgcagcgctatcgcaat
ctcagcacggcaagggctgtgacggcagtcgaagttcgcgacgcggaaatcgcgctgcag
gcggcagaactggcgctgaaaacggcggagctcgatctcagacgccgcgatatcgtcgcg
ccctcgaagggggtcgtcggcatcatcaccgtcaatgtcggcgactacgtcacgacctcg
acgccgatcgtggtggtggacgaccgatcgcaaatcctcgtcgatttctgggtgccggaa
cgcttcgccagcaagatttttgtcgaccagccggtgacggcgaatgcgatcgcgcagccc
gggcggcagctcgaaggcgtcattcacgcgatcgacaaccgtctcgatcaggcgagccgg
acgctccgcgtccgcgcacggctcgaaaatcccgacgacatgctgcgggcgggcatgtcc
ttctcggttaccatggccttcgacggtgaccgttatccgacggtcgatccgttggcgatc
cagtggagttcggatggatcctatatctggcgtgtcaacggcgaccgcagcgagcgagtg
ccggtcaagattatccagcgcaatccggacaaggtgcttgtcgacgccactcttgccgag
ggcgaccgcatcgtgaccgagggcgtgcagcgcctgcgcgatggcggcgcggtgcgcgtc
gccggcgaaaaccggcccgagcctcagcagaaggtcgcgggagaggcacaatga
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