Echinococcus granulosus (hydatid tapeworm): EGR_06061
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Entry
EGR_06061 CDS
T05553
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_06061
03012 Translation factors [BR:
egl03012
]
EGR_06061
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGR_06061
5.6.2.6 RNA 3'-5' helicase
EGR_06061
Spliceosome [BR:
egl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EGR_06061
Translation factors [BR:
egl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EGR_06061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
AAA_19
ResIII
ATPase
nSTAND3
HA2_C
AAA_11
GCP_C_terminal
LIM
AAA_23
AAA_22
Motif
Other DBs
NCBI-GeneID:
36341776
NCBI-ProteinID:
XP_024350265
UniProt:
W6UZI5
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MSSYASPTSMSDAEGIKTFVYTWLHKSQRKVPEYTFQQRSMGRGRLRFICELRVDGFAYI
GVGNSVNKKDAQTNAARDFASFLVREGYLKESEVPTIRAEEYRHVADEDRHCAAMYPSTS
SSGAMHPSYHPPHLQVTETDVPGRGPNDSYINRIMDRIKLEEAEGIDLTADIHGGWSMEN
SKARLNEYLQASRQPPVQIKFTSIGPDHNKSFLAEATVWARRVNKTLYARENGSNKTMAS
RACCLSLVRQLFHVGEIEAYCGERKRKRSDDLPPLAVKLNPDLENRLHALLERLHLVPNL
SPPVPSLKTSRTAVGSSEEEHNMITNYQVADFEPRPRQSAQLISWCPPIENWNPWTAYNI
DEGPEALMSLAQLSQTYKEQYERRINSRGYEVIREERNSLPVAAFSQQILETIARNQVTL
IKGETGCGKTTQIPQFILDSYLASGRGAECSVLVTQPRRICAISLAERVASERCETVGIS
VGYSVRFETILPRPYGSILFCTIGTLCRKMEAGIRGVSHIIVDEIHERDVNTDFVMILMR
DLVRANPSLRVILMSATIDTTTFTEYFDNTAIVELEGRTYPVSCFYLEDCINMTNYVPPP
NYNEKKNKKPRLEEELTMETEENCNSICPPGYPPSVAERMRQIPEKEVPFTLIGSLLEYI
CRMNIDGAVLIFLPGWNTISMLRKYLQTHPCFSNPNEFLILPLHSQVPREDQRLVFRPAP
PGIRKIVLSTNIAESSITINDVVFVIDTCLARVKMFTARNNLTSYSTMWASLTNLEQRRG
RAGRVRAGFAYHLCSRARLSRLEHYATPEILRTPLHELALMIKLLRLGDIQTFLRKALQS
PPLDAVIEAEYTLREMKALDSNDELTPLGHILARLPIEPRLGRMLVFSCAFRLGGAMALV
AAHSSFGCDVLAMPPDRRRLSWEQLRFAATTNSDHLAMLNAFQVWSTKRAQDGDQAANYF
CDVRELNAFSLRIIDEAANQICNILMGLGFPESVLSDRLINFNNRSCSTFDYVAAMLTNG
LYPNIAYHVEKRKLLTAEGKCALVHKGSVNCTKNPTFAFPLFAFTEKIRTQAISCKTLTM
VTPIQLLLFGCRRGVWKPKSTGSESARSDERRVALMEEEGVVLLDDWLPFRMRYSTAARI
FALRPALEALLVRVCLRPACLENLSPEDRSVIELTKELCRLTALRDAATLDEATCARFNA
DPRCPHPTDSRRQIGPPEMSATSFDWDESQSLGWGYREWQDDWSHTSSNAGHPPPYCVHA
GVHGTKRDYPWPNRETYIPQNFGDRSGSLPQSAGYYAEPPLRHEKLDYGYEPTLSRPPGP
RIGMIIYKFVLSSRESSPGWVPLRSHVIDLLNQNKMSAFLLASNVLTNEESAYWLCVDCS
TVRPRFTHHEQESVVENQEDQSINDGDSLSENNWEILGDELNIYIPDEQLSVLARAFPGV
KAFSHSVSVYGRECALCSSHLSPDDATLDFFDGNFYCSNCHQGQEAVIPRDIIECWDFTP
KPVSFATKKFLDSISSHPLIDIGLINPSLFACIPALLNLRRLRRTLSLLWSLVSRCSKAT
SRSLVLALKNRSYMLDNVDTIDRYSFQDLLDVQNGDLEELIQAAVDQVALTHVTSCSGCR
AWLSFCDICKDVSRPIWPYQVAQFRRVSSRGPRRLLVCEVERHVRFSLSS
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttacgcctctccaactagtatgagtgatgcagaagggattaagacttttgtc
tacacctggctgcataaatcacagcgaaaagttccggaatacaccttccagcagcgctca
atgggtcgtggacgcttgcgctttatatgtgagcttcgtgtagatggctttgcctatatt
ggtgtgggcaattcggttaacaaaaaggacgcccaaaccaatgctgcacgtgattttgcc
agttttcttgtccgtgagggctatttgaaggagtcggaagtccctactatcagagctgaa
gagtacagacatgtggcggacgaagataggcattgcgccgcaatgtacccatctacgtct
tccagtggtgcgatgcatccatcgtatcacccgcctcatttacaagttactgagaccgat
gtgcctggtagaggtcctaacgattcttatataaacagaataatggacagaataaaactc
gaggaggcggaggggattgacctcacagctgatattcacggtgggtggtcaatggaaaat
tcaaaagcccggttgaatgaatatctacaggcttcacgtcaaccgccggtccaaataaaa
ttcacatccattggacctgatcacaataagagtttcctggctgaggcaactgtttgggca
agacgtgtgaataaaacactttatgcgcgtgaaaacggatcaaataaaactatggcgtcc
cgagcctgctgcctttctctcgtgcgacagctattccacgtaggtgaaattgaagcctac
tgtggtgaacgaaaaaggaagcgctctgacgatttaccacccctcgcagtaaagctgaat
ccagaccttgaaaaccgtcttcatgcgctgctggaacgattgcatctcgtgcctaacctc
tcaccacctgtaccttccctgaaaactagtagaactgctgttggtagttctgaagaggag
cacaatatgatcacgaattatcaggttgctgatttcgaaccacgtcctcgtcaatcggcc
cagttaatttcatggtgcccacccattgaaaactggaatccctggactgcttacaacatc
gacgaaggccctgaggcattgatgtctctggcccaattaagtcagacctataaggagcag
tatgaacgtcgcatcaacagtcgaggatatgaagtgataagggaagaacgtaattctttg
ccggtagctgctttcagtcaacaaatccttgagactatcgcaagaaatcaggtcactctg
atcaaaggggaaactggttgtggcaagactacgcagatacctcaattcatactggactcg
tatttggcgtcaggcaggggcgcagagtgctcggtgttggtgacacagccgcgtcgtatc
tgcgccatctccttggcagagcgggtggcgagcgaacgctgtgagacagtgggcatctcg
gtgggctactcggtacgctttgagacgattttgcctcggccctacggttctatcctcttc
tgcaccattggcaccctctgtcgcaaaatggaggcgggcatccgtggggtctcacacatc
atcgtcgacgagattcacgagcgtgacgtcaacacggacttcgtgatgattctcatgcgc
gatctggtccgtgccaacccctcccttcgtgtcatcctcatgtccgccactatcgacacc
accaccttcacagaatacttcgacaacacggccattgttgaactcgagggacgaacctat
ccggtttcgtgtttctacttggaagattgtatcaatatgacaaactacgtgccgccgccc
aattacaatgagaagaagaataaaaagccacgactggaggaggaattgaccatggagacg
gaggagaactgcaactccatttgtcctccagggtatcctccttcggtggcggaacgcatg
cgccagattccagaaaaagaggttcccttcaccctcatcggtagtctactcgagtacata
tgcagaatgaatattgacggtgcagtcttaatattcctgcctggctggaatacaataagc
atgttgaggaaataccttcagacgcatccttgcttcagcaatccgaacgagttcctcatt
ttgccgcttcactcacaggtgcctagggaagatcaaagacttgttttccgacctgcacct
cctggtattcgaaagattgtcctctccaccaatatagccgagtcctcgattaccattaac
gacgtggtgtttgtcattgacacctgtctggctcgagtgaagatgttcacggcgcgaaat
aacctgaccagctactctacgatgtgggcaagtcttactaacttggagcagcgacgaggt
cgtgcgggtcgggtgcgggcaggattcgcatatcatctttgcagccgggcgcggttgagt
cggttggagcactacgccactcctgagattctccgcactcccctccatgaactggccctc
atgatcaagcttctccgtctcggtgatattcagacctttcttcgaaaggccctccaatcc
cctcctctcgatgctgttatcgaggcggagtacacccttcgtgagatgaaggctttggac
tcgaatgatgagttaacaccactgggtcacatcctagcacgtctgccaatcgagcctcgg
ttgggtcgaatgctggttttctcttgcgcctttcggctgggtggcgcaatggcgctggtc
gcggcacattcttccttcggctgcgacgtcctcgccatgccaccggatcgccgacgcctc
tcgtgggagcaactccgtttcgctgcgaccactaattccgatcacctggcaatgctcaac
gccttccaggtctggtccaccaagcgcgctcaggatggcgatcaagcggctaactatttc
tgtgacgttagggagctcaacgccttctccttgcgcatcatcgatgaggccgcaaatcag
atttgcaatatcctcatgggtttgggctttcccgagtcagtgctgtccgatcgtcttata
aactttaacaaccggagctgctcaacttttgactacgttgcagcaatgttgaccaacggt
ctctatcccaacatcgcctatcacgtggaaaagcgcaaacttctcacggctgagggtaaa
tgcgcgctcgtgcacaaaggttctgtcaattgcaccaagaatcctacattcgccttcccc
ctctttgccttcaccgaaaagattcgaacacaggcgataagctgcaagaccctgacaatg
gtcacacccattcagttgctgctcttcggttgtcgacggggcgtctggaaaccgaagtcg
actggttcggagagcgcaagatctgacgaacggagggtggcgctgatggaggaggagggt
gttgtgttactggacgattggctgcccttccgcatgcgatatagcactgcagcccgtata
ttcgcgttgcgaccggcactagaggctctcctcgtacgggtgtgcctacggcccgcctgc
ttggagaatctctcgcccgaggacagaagtgttattgagctcaccaaggaactgtgtcgt
ctcactgctctgcgcgacgcagcaaccctcgacgaagcaacttgcgctcgcttcaacgct
gatccaaggtgccctcaccccactgactctcgtcgacaaatcgggccgcccgaaatgagc
gccaccagttttgactgggacgaaagccaaagtcttggctggggctatcgtgaatggcag
gatgattggagtcacacctctagcaacgcaggccatccacccccctactgcgtgcatgcg
ggtgtccacggtacgaaaagagattatccgtggccgaatcgggagacttacatccctcaa
aattttggtgatcgaagtggctccctgccacaatctgctgggtactatgcggaacccccg
ctgcggcacgagaagcttgattacggctacgaaccgacgttatccaggccgccaggaccg
cgtattggtatgattatttacaaatttgtgttgtcatcacgggaatctagtcctggctgg
gtgccgttgaggtcgcatgtgattgacttgttaaaccagaacaaaatgagcgcatttttg
ctggcatccaatgtgcttaccaatgaggagtcagcgtactggctgtgtgtagattgttct
acagtcagaccccgattcacacatcatgagcaggaatctgttgttgaaaaccaggaggat
cagtctattaatgatggggattccttgtctgaaaacaattgggaaatcctcggagatgaa
ctgaatatttatatacccgatgaacaactgagtgtactggctcgtgcctttcccggtgtg
aaggctttttcgcactccgtgtctgtctacggacgcgagtgcgcgctctgctcaagccac
ctatctccggatgatgcaacgcttgacttctttgatggcaacttctactgctctaattgc
catcagggccaagaggccgtgattccacgcgacatcatcgaatgctgggacttcactcca
aaaccagtgtctttcgctacaaaaaaatttcttgattccatttcgtctcatccgttgatt
gatatcggattgataaacccttccctgtttgcgtgtattccggcgctgttaaacttgcga
cgtttgcggcgaacactctcccttctctggtctctagtgtcgagatgctctaaagctaca
tcccgcagcctagttttggccctgaagaaccgtagctacatgttggacaacgtcgacacc
atcgacagatactccttccaggaccttctggatgtacagaacggtgatctggaggaactc
atacaggcagcagtcgaccaagtggccttgactcatgttacctcctgctctggttgtcga
gcatggttatcgttttgtgatatctgcaaggacgtgtcaagaccgatttggccttaccag
gtcgcccaattcagacgagtaagttctcgaggacctagaagacttctggtctgtgaagtg
gagaggcatgttagattctcactgtcatcctag
DBGET
integrated database retrieval system
