Echinococcus granulosus (hydatid tapeworm): EGR_08471
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Entry
EGR_08471 CDS
T05553
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_08471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_08471
Spliceosome [BR:
egl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EGR_08471
Complex C
U5 SnRNP specific factors
EGR_08471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
EF-G_D2
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
36344186
NCBI-ProteinID:
XP_024347861
UniProt:
U6JHZ3
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPNILSDEEVEGDADSVAEEEPEEKEDHSHAMQLLEKTDEAFSVVLH
DDKKYYPSAMEVYGPDVETLVQEEDAQPLTQPLIEPIKRKNFAYSEYSLPETTYDPEFLA
DLMDCPELIRSVAFCGHLHHGKTSFVDCLIEQTHPDIRAKEDKDLRYTDYLKLEVERGLS
VKSTPMTLVLSDLKNKSYLLNIFDTPGHVNFSDEVTAAFRLCDAVCIFVDVSEGVLMNTE
RLIKHALQERLPILLCLNKIDRLVLELKLPPNDAYYKIKNIIDEVNSLISTFSEGAGVSL
EPQHIVSPLLGNVCFASSYYRFCFTLESFAKIYTDTFADSIDYKSFAKRLWGDQYFSSET
RTFKSKPPTASSLRSFVEFILEPIYKIFAQTAGDVDTCLPRLCSELGIHLSKSEFKLNVR
PLLRIIFSRFFGDFSGFVSMCVKHVPSPVASARVKISHTYSGPLDSAIARDMIACRAESP
HLMVHTTKLYPDEDAVSFHAFGRVLSGRLEAGQDVRVLGEAYSLNDEEDSRPAVAGRLWI
FCGRYRLEVNRVPAGNWVLIEGVDQAIVKTSTITSAHSDSEAFIFHPLTFNTISIVKISV
EPANPSELPKMLDGLRKVNKSYPLLMTKVEESGERIIRGTGELYLDCVMHDLRKLYSDIE
VKVADPVVAFCETVVETSSLKCFSESPNKKNKITMIAEPLDKGLAEDIENKVVRIDWPKK
QLGEFFLKKYEWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKGLLGSVRDYIVQGFQW
GTREGPLCDEPIRNVKFKILDALISGEAHQRGSGQIIPTARRVAYSAFMMATPRLMEPYY
YVEVQAPADCVSAVYNVLNLRRGHVTHDAPISGSPLYIIKAFLPVIDSFGFETDLRTHSQ
GQAFCMSVFNHWQMVPGDPLDRTIQIQPLVAQPATHLAREFMIKTRRRKGLNEDVSINKY
FDDPMLLEFAKQDVMLSYAL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgacttgtacgacgaattcgggaattatataggtccaaatatcctgtcggat
gaggaggtggagggggatgctgatagtgtcgctgaagaagaaccagaagaaaaggaagat
cacagtcatgctatgcaactccttgagaaaactgatgaggccttctcagtagttttgcat
gatgataagaagtactacccgagcgcaatggaggtctacggacctgatgttgaaacattg
gttcaagaagaggatgctcagcccttgactcagcctctaattgagcctattaagaggaag
aattttgcctactctgaatactccctacccgagaccacatacgatccggagttcttggct
gatctgatggattgtcctgaactcattcgcagtgttgcgttttgcggacatctgcatcat
ggaaaaacttcgttcgtcgattgccttatagagcaaacacatcccgatattagagcgaag
gaagacaaggatttgcgctatactgactacctaaaacttgaagtcgagagaggtttgagt
gttaagtctactccgatgacgctggttctgtcggacctgaagaataagtcatatcttctt
aacattttcgacacccctggccacgtgaacttctctgatgaggtgacagcggccttccgc
ctatgtgatgccgtttgcatatttgtggacgtcagtgaaggtgttctgatgaacacagaa
cgtctaatcaaacacgcacttcaggagcgccttcctattcttctgtgcctcaacaagatt
gaccgacttgttctcgagcttaagctaccaccaaatgacgcttactataagattaagaac
attatcgacgaggttaactccttgatttcgactttctcagaaggagccggtgtttccctc
gaaccccagcatatagttagtccactgctgggcaacgtatgtttcgcgagctcctactat
cgattctgctttacattggagtcttttgcaaagatctatactgacacctttgcagattcc
atcgactataagagttttgccaagcgtctatggggcgatcagtacttcagttcagagacg
agaacctttaaatcgaagcctccgactgcatcctcccttcgctccttcgtggagttcatt
ctcgagccgatctacaaaatattcgcacagaccgccggcgacgtggatacttgcttgcct
aggctctgcagtgaactcggcattcacctttctaagtccgaatttaaactcaacgtccgt
cctttgttgcgaatcatttttagtcgattctttggcgatttctccggtttcgtttccatg
tgtgtgaagcacgtgcccagtccggtggcaagcgccagagtgaagattagtcacacttac
tcgggtcctctggactctgctatcgcgcgcgatatgatcgcgtgccgtgcagagtcacca
catctcatggtgcatactactaagctataccccgacgaggacgctgtttccttccatgct
tttgggcgcgttctctccggtcgactggaggctggacaggatgtgcgggtgcttggggag
gcatactctctcaacgatgaggaggattctcgtcctgctgttgctgggcgtctctggatc
ttttgcgggcgatatcgtcttgaggtgaatcgtgtgcctgcaggcaactgggtgttgata
gagggtgtagatcaagctattgtcaagacgtcaacaatcacatctgcccattcagacagt
gaggcttttatctttcatccacttaccttcaatactatctcgatcgtcaagatttctgtt
gaaccggccaatccctcagaacttcccaaaatgctcgatggtctgagaaaggtgaacaag
agttaccctctgctcatgaccaaggtggaggagtcaggtgaacggattattcgaggaaca
ggcgaactctaccttgactgcgtaatgcatgatctacgcaagctctattctgatatcgag
gtcaaagtcgccgatcctgtcgtggcgttctgtgaaaccgtcgttgagacctcatccttg
aagtgcttttcagagtcaccgaacaagaagaacaagatcaccatgatagccgaaccactt
gacaagggtctggcggaggatattgaaaataaggtggttcggatcgactggcctaaaaag
caacttggggaattcttcctcaagaagtatgagtgggaccttctcgctgcaagatccatt
tgggctttcggcccagactcaacaggtccaaacatcctagtggacgatactcttccgtca
gaagtggacaaggggcttttgggttcagtgagggactacattgtacagggtttccaatgg
ggtacacgggaaggtccactttgcgacgaaccgatccgaaatgtgaaatttaagattttg
gatgcgctaatttcgggtgaagcacatcaacgtggctcaggccaaatcattccgacagcg
cgtcgagttgcctactctgcctttatgatggccacgccacgactcatggagccctattac
tacgttgaagtgcaagcgcctgccgactgtgtgtccgccgtttacaacgtcctcaatctt
cgacgaggtcatgtgactcacgatgctccaatctccggttcaccgctctatatcatcaaa
gccttcctaccggtgattgactccttcggatttgagacagatctgcggacacactcgcag
ggccaagccttttgcatgtctgtcttcaatcactggcaaatggtgcctggagacccgctg
gaccgaaccatccaaattcagcccctggtggcgcaaccggccacccaccttgctcgcgag
tttatgatcaagacgagacgaaggaagggtctcaatgaagatgtaagcattaacaagtac
ttcgacgacccgatgttgctggaattcgcaaagcaggatgtcatgctaagctacgcattg
taa
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