Aurantiacibacter gangjinensis: BMF35_a1692
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Entry
BMF35_a1692 CDS
T04581
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
egn
Aurantiacibacter gangjinensis
Pathway
egn03030
DNA replication
egn03410
Base excision repair
egn03420
Nucleotide excision repair
egn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMF35_a1692
03410 Base excision repair
BMF35_a1692
03420 Nucleotide excision repair
BMF35_a1692
03430 Mismatch repair
BMF35_a1692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egn03032
]
BMF35_a1692
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a1692
Enzymes [BR:
egn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BMF35_a1692
DNA replication proteins [BR:
egn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BMF35_a1692
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BMF35_a1692
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMF35_a1692
MMR (mismatch excision repair)
DNA ligase
BMF35_a1692
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMF35_a1692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH_5
SnoaL_3
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
APE28521
UniProt:
A0A0G9MQ83
LinkDB
All DBs
Position
I:1733129..1735183
Genome browser
AA seq
684 aa
AA seq
DB search
MMNDAQAANELMRLARQIAKHNKLYHAEDAPEISDAEYDALVRRNAELEAQFPHLVRADS
PSQAVGHEIAASPLSKVEHEVRMLSLDNAFADEEVADFAARVRRFLSLDESETVAFTAED
KIDGLSCSLRYEKGELVLAATRGDGSVGETVTANVAHVEGIPQALKGDVPDVFEIRGEVY
MSRADFAALNAAQEEAGGKLFANPRNAAAGSLRQKDASVTAERPLKFWAHGWGATSDVPG
ETQQDVVRAIESWGVPVSPLFTRVESVEAMLAHYATIAAARPDLPYEIDGVVYKVDRLDW
QKRLGFVAKAPRWALAHKFPAERAETTVEAIDIQVGRTGKLTPVGRLAPVLVGGVTVTNV
TLHNRDEIARLGVRPGDRVVIQRAGDVIPQVVENLTRDADRPAFDFPDHCPVCDSEAVAE
EGEVDVRCTGGLICRAQQFERLKHFVSRGALDIDGLGEKTIAEFIEHGWLDSGPADIFRL
KNREAEILALDGWKEKSARNLLASIEAKRQPDAARLLFGLGIRHVGAVTARDLLKHFHAL
PALRAAAEAARAGDEDAAQSLTAIDGIGSAVVEALGDFFHEEHNRALWDDLLSEVSPPRY
EVESVDSPVAGKVVVFTGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKL
KKAEELGIEVMDEAGWAAIVEAAG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgatgcccaagccgccaacgagttgatgcgtctcgcgcggcagatcgcgaag
cataacaagctctaccacgccgaggacgcgcccgagatctcggatgcggaatatgatgcg
ctggtgcggcgcaatgccgagctggaggcgcagtttccacatctcgtccgcgcggattcg
ccgtcgcaggcagtggggcatgagatcgccgcttcgccgctctccaaggtcgagcatgaa
gtgcggatgctcagcctcgacaatgcttttgccgacgaagaggtggccgattttgcggcg
cgggtgcggcggttcctgtcgctggacgaaagcgagacggtcgctttcaccgctgaggat
aagatcgacgggctatcctgctcgctgcgctacgagaagggcgaactggtgctggccgcc
acgcgcggggatggctcggtcggcgagactgtcaccgccaatgtcgcgcatgtcgaaggc
attccgcaggcgctgaaaggcgatgtgcccgacgtgttcgagatacgcggcgaggtctat
atgagccgcgccgatttcgcagcgctcaatgcagcgcaggaggaagcgggcggcaagctg
ttcgccaatccgcgcaatgcggcggcgggttctttgcgacagaaggatgcgagcgtcacg
gcggagcgcccgctcaaattctgggcgcatggctggggcgctacgagcgatgtgccgggc
gaaacgcagcaggatgtggtgcgcgccatcgaaagctggggcgtgccggtcagcccgctt
ttcacccgcgtcgaaagcgtagaggccatgctggcgcattacgcgacgatcgccgccgcg
cggcccgaccttccctatgaaatcgacggcgtggtctacaaggtggaccggctcgactgg
cagaagcggctgggctttgtcgccaaggcaccgcgctgggcgctggcgcacaagtttccc
gccgagcgcgccgaaaccacggtggaggccatcgacatacaggtgggccgcaccggcaag
ttgacgcctgtcgggcggctcgcgccggtgctggtgggcggggtgactgtcaccaatgtc
acgctgcacaatcgcgacgagatcgcgcggcttggcgtgcgtccgggcgatcgggtggtt
atccagcgcgctggcgatgtcatcccgcaggtcgtcgagaacctgacccgcgatgcggac
cgccctgccttcgactttcccgatcattgcccggtctgcgacagcgaggctgtggccgag
gaaggcgaagtcgatgtgcgctgcaccggcggcctgatctgccgcgcgcagcaattcgag
cggttgaagcacttcgtcagccgcggcgcgctcgatatcgatgggctgggcgaaaagact
attgccgagtttatcgagcatggctggctggacagcgggcctgcggacatttttcgcctg
aagaatcgcgaggcggagatccttgcgctcgacgggtggaaagagaaatcggcccggaac
ctgctcgccagcatcgaagccaagcgccagcccgatgcggcgcggctgctattcggtctc
ggtatccgccatgtcggcgcggtgacggcgcgcgatctgctgaagcatttccacgcgctt
cccgccttgcgggctgctgccgaagccgcgcgggcaggggacgaggatgccgcgcaatcg
ctgaccgccatcgacggtatcggcagcgcggtggtcgaagcgcttggtgatttcttccac
gaagagcacaatcgcgccctctgggacgatttgctcagcgaagtttcgcccccgcgttac
gaggtggaaagcgtcgacagcccggtggcgggcaaggtcgtcgtctttaccggcaagctg
gagacgatgagccgcgacgaggcgaaggcgcaggccgagcggctgggcgcgaaagccagc
ggctccgtgagcgcgaagacagacttgctggtggcaggcccgggcgctggatcgaagctg
aaaaaggccgaggaactgggcatcgaagtgatggatgaagcgggctgggcggccattgtg
gaggcagccggatga
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