KEGG   Eucalyptus grandis (rose gum): 104420030
Entry
104420030         CDS       T03547                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104420030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104420030
Spliceosome [BR:egr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104420030
 Complex B
    104420030
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104420030
SSDB
Motif
Pfam: TUDOR Agenet SMN_Tudor CHASE3 Wtap YlaC DUF4763
Other DBs
NCBI-GeneID: 104420030
NCBI-ProteinID: XP_010030230
UniProt: A0A059ATH5
LinkDB
Position
9:complement(43606538..43613170)
AA seq 302 aa
MQGGEEEVSIEELSSNLSTYKDQLRQVRQLLVDDPGNSEYADMQKELEEVIALTEELLAT
ARQNEISGSDIARSASESLSFSEAKGSSEKKMQPVSDYHQLLPIGSKVQAVYSDDGEWYD
ATIEAHTANGYYVCYDGWGNKEEVDPDNVRPIKEGEVNAILEAERVAEATKQDIKRKIAQ
AANVDFQSRTLPAKLRIEPDDPEDVKAAKRKKIHSFKSKMRMEQLEVAQNKRQNDWQQFQ
STKGRAKKIGFLTGRKRESIFKSPDDPHGKVGVTGSGKGLTEFQKREKHLHLKGANVEAS
DE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcaagggggagaagaagaagtgagcatcgaagagctctcctccaatctctccacttac
aaagaccaactgcggcaggtcagacagctattggttgacgatcctggaaattcagaatat
gccgatatgcagaaggaacttgaagaggttattgctttaactgaagagctgctcgcaact
gcaaggcaaaatgagatttctggatcagacattgcgagaagtgccagcgaatcccttagt
ttttccgaggcaaagggttcctcagaaaagaaaatgcaacctgtttctgattatcatcaa
ctccttcctattggatctaaagttcaagcagtttatagtgacgatggtgaatggtatgat
gcaacaattgaggctcacaccgctaatggatattatgtctgctatgatgggtggggaaat
aaggaggaggtggaccccgacaatgtgaggccaatcaaagaaggtgaggtcaacgctata
ttggaagccgagcgggttgctgaagctacgaagcaagatatcaaaaggaagattgcgcag
gctgctaatgtcgatttccagtcaagaacattaccggcaaagctccgaatagagccagat
gaccctgaagatgtgaaagcagcaaagcgcaaaaagatacattctttcaagtcaaaaatg
cgaatggaacaacttgaagttgcacagaataagcggcaaaatgattggcagcagttccaa
tcaaccaaaggcagggctaaaaagattgggttcctcactgggaggaaacgtgagagcatc
ttcaagtctccggatgatccgcatggtaaggttggtgtcaccggaagtggaaaaggattg
acagagtttcagaagagggaaaagcacttgcatctcaagggagccaatgttgaggccagt
gatgagtaa

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