Eucalyptus grandis (rose gum): 104426866
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Entry
104426866 CDS
T03547
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104426866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egr03000
]
104426866
Transcription factors [BR:
egr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104426866
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104426866
NCBI-ProteinID:
XP_010038341
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Position
11:49711735..49717777
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AA seq
570 aa
AA seq
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MSHCVPDFDMDDDYSLPSFPRPRRPHLAGDEIAELLWQNGPVVMQSQRSVKKSEPSGCDG
YQLSAIQSQTQHHHQQQQQQQQQQQPQPQPQPQQQQQREQEQQQHLFMQEDEMASWLHYP
LNDASFVADFCSDLLYPPPCANVNVAATAARASPVVAELRQQPPPKPPTPMAPPRRFENF
GHFSRLNRPRVDESGPSNSSRAGNESTVVDSSGTPAVGPRSRVSEALHCDVSRGTVDGGA
AALATSSADGGGREMGTCELTVTSSPGASSACAEPLPPRKSSSTPPPPAEDRKRKGIEID
ADPDADPDADECHSEDVELESADTKKPARGSTSSKRSRAAEVHNLSERRRRDRINEKMKA
LQELIPHCNKSDKASMLDEAIEYLKSLQMQVQMMSMGCGVVPMMFPGVHQYVPHMGMGIG
MAMGMDMGMNRPILPFPNILSGSALPTPAAGAHLGPRFPMPTFHMPHVRAPDPSRISPTI
QSNPLLSSLALQSQNQARVPNFIDPYQQYFGLRHMQLPLQQNQTPSGSSKPSTSKVGENL
EKPPSDPLRAHSQPCIIGVASGAGGMDAAN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagccactgcgtccccgacttcgacatggacgacgactactccctcccttccttcccc
cgcccccgcaggccccacttggccggcgatgagatcgcggagctgctgtggcagaacggc
cccgtggttatgcagagccagcgatcggtcaagaaatcggagccctccggctgcgacggt
taccagctgagcgcgatccagagccagactcagcatcaccatcagcagcagcagcagcag
cagcagcagcagcagccgcagccgcagccgcagccgcagcagcagcagcagcgggagcag
gagcagcagcagcacctcttcatgcaggaagacgagatggcctcctggctccactatcct
ctcaacgacgcctccttcgtcgccgatttctgctccgatcttctctaccctcctccttgc
gccaacgtcaacgtcgccgcgaccgccgctcgcgcttctcccgttgtcgcggagctccgg
cagcaaccgccgcccaagccgccgacgccgatggctcctccgaggagattcgagaacttc
ggccacttctcgaggctgaatcggcctagagtcgacgaatccgggccgtccaattcgtcc
cgcgcggggaacgaatcgaccgtggtggattccagcgggacgcccgcggtggggccccgc
tctagggtttccgaggcattgcattgcgacgtctcgcgcgggaccgtcgacggtggagcg
gcggccttggccacgtcgtcggccgatggcggcggtcgcgagatggggacgtgcgagttg
acggtgacttcatcgccgggcgcctccagcgcctgcgctgagcctctgccgcctcggaag
tcgtcgtcgacgccaccgccgccggcggaggacaggaagcggaaggggatcgagatcgac
gccgaccccgacgccgaccccgacgctgacgagtgccacagcgaggatgttgagcttgaa
tctgccgatacaaagaaaccagcacgtggctccacatcttctaagaggtctcgagctgca
gaggtccacaatctgtcagagaggagacggcgggataggataaatgaaaaaatgaaggct
ctacaagaattaattccgcattgtaacaagtctgataaggcttcgatgctggacgaggca
attgagtacttgaagtcgcttcaaatgcaagtgcagatgatgtccatgggatgtggtgtc
gtaccaatgatgtttccaggtgttcatcagtacgtgccccacatggggatgggtattggc
atggccatgggtatggatatgggaatgaatcgccctattttgccttttccaaacatttta
tctggttcagcactgccgacgccagcagctggagctcatctgggtccaagatttcctatg
ccaacctttcatatgcctcatgttcgtgcacctgatccatccagaatttccccaaccatc
cagtctaatcctttgttaagctctcttgctttacaaagtcaaaatcaggcgagggtccca
aactttattgatccttaccaacagtactttggcctccgccatatgcagttgccactgcag
cagaatcagactccctctggtagcagcaagccaagcaccagcaaagtaggggagaatctt
gaaaaaccaccatcagatcctctgcgagctcacagtcagccgtgtatcattggcgtagcc
tcgggagcaggtgggatggacgccgccaattag
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