Eucalyptus grandis (rose gum): 104436934
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Entry
104436934 CDS
T03547
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104436934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104436934
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104436934
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104436934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104436934
NCBI-ProteinID:
XP_010048087
UniProt:
A0A059CPB8
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All DBs
Position
3:complement(22634832..22640072)
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AA seq
313 aa
AA seq
DB search
MGEVAIEGPGFQHFDAENLQHASYKESQMDNEFAVLQQMNGEQMPIETSKGDASATKLLE
SGHMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNDAKNNINVNQKQRHELPRHQVQQVVCS
LCGTEQEVRQVCINCGVCMGKYFCGTCKLFDDDTSKKQYHCNGCGICRIGGRENFFHCYK
CGCCYSILLKNSHPCVEGAMHHDCPVCFEFLFDSRNDVTVLPCGHTIHKTCLKEMREHHQ
YACPICSKSVCDMSKVWEKFDMEIAATPMPEPYQNKMVWILCNDCGKTSQVQFHVVAQKC
AHCKSYNTRQTRG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagtagccattgaagggccagggtttcaacattttgatgcggaaaaccttcag
catgcctcctataaagagagccagatggacaatgagttcgcagtccttcagcagatgaat
ggggagcagatgcctattgaaacatctaaaggtgatgcgagcgctaccaagctgctagag
agtgggcatatgcagtatggatgtcctcattaccgtcgaaggtgccgcattcgagccccc
tgttgcaatgagatttttgattgccgtcactgtcataatgatgcaaagaataatatcaat
gtaaaccaaaagcagcgacatgagttgcctcgccatcaagtgcaacaggttgtatgttca
ctctgtggtactgaacaagaggtccggcaggtgtgcattaactgtggtgtttgcatgggc
aagtacttttgtgggacttgtaagcttttcgatgacgatacatccaaaaagcagtatcat
tgcaatggatgtggcatttgcagaattgggggacgagagaatttctttcactgttacaag
tgtggttgctgctattcaatcttgctgaaaaatagccatccttgcgtggaaggagcgatg
catcatgattgtcctgtttgctttgagtttctatttgattcgagaaatgacgtgacagtc
ttgccttgcgggcacacaattcataagacctgcttaaaagagatgagagaacatcaccag
tatgcctgcccaatctgctcgaagtctgtctgtgatatgtcaaaggtctgggagaaattc
gacatggagattgcagccacgccaatgccagagccttatcaaaacaaaatggtttggatc
ctctgcaacgactgcgggaaaacgtctcaggtccaattccatgtagtcgctcagaaatgc
gcccattgcaagtcctataatacgcgccaaacacgtggctga
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