Eucalyptus grandis (rose gum): 108955021
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Entry
108955021 CDS
T03547
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108955021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egr03000
]
108955021
Transcription factors [BR:
egr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108955021
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
RPN13_C
bHLH_NPAS4
Draxin
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
108955021
NCBI-ProteinID:
XP_018717530
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All DBs
Position
8:complement(12674005..12676893)
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AA seq
336 aa
AA seq
DB search
MSALFPDFLIDDDAEFSVPSPTKLAMVEDEIMALLSQDGCQRLAKTRSPLFMYEDAAIAA
GGSDEVAARHEMMVTSLPVGSTTVGTVGLAPTRAASQLRMQTEKRKDVSGWKDVYFESAN
AREQVAKSTPAKRSQRANVHNLSERRRRDKINGKMRALQQLIPRSTKADKASLLDKAIGY
LKSLQSQVQSLQSQVQMMSMGCGLVCGVFPGVPPYMPCMNMGTAMDADMNCARMLFPNVL
PSLMMQPSANGAHLGPGLPIPTFSTQQETPDQFGTPSGTLSTNHLDPALSSQMIKNLSQQ
FSINANSYQQHLGLPDIQQPSQKDQLMIQPGTAKPE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcactcttccctgacttcctgattgacgacgacgctgagttctcagttccatcc
ccaacgaaactagccatggttgaggatgagatcatggcactgctctcgcaagacggatgc
cagagactggccaagacgcgatctcccctgttcatgtacgaggacgccgcaatagcagca
ggcggcagtgacgaggtggcggcacgtcatgagatgatggtgacatcattgcccgttggc
tccaccacagttggcacagtggggctagctcccacgagggcggcgtcacagttgcgcatg
cagacggagaaaaggaaggacgtgagcggctggaaggacgtttactttgaatctgctaat
gcaagggagcaagttgctaaatcaacccctgcaaagagatctcagcgtgcaaatgttcac
aatctatcagagaggagacgtagagacaaaataaatggaaagatgagggccttgcaacaa
cttattcctcggtccaccaaggctgataaagcgtcattgctggataaagcaattgggtac
ttgaagtcacttcaatcgcaagtgcagtcacttcaatcgcaagtgcagatgatgtccatg
gggtgcggcctggtctgtggtgtatttcctggtgtaccaccttacatgccatgcatgaac
atgggcactgcaatggatgcagacatgaattgcgccaggatgctatttcctaatgtcttg
cctagtttgatgatgcaaccgtcagctaatggagctcacttgggccctgggctccctatt
cccacctttagcacgcagcaagaaactcctgatcaatttggaacaccatctggaacacta
tcaactaatcacttggatccagcattaagctcacagatgataaaaaacctgagccagcaa
ttttccataaatgccaattcctatcagcagcatctgggccttcctgatatacaacaacca
tcacaaaaggaccaactgatgatccagcctggtactgccaagccagagtag
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