Erythranthe guttata (spotted monkey flower): 105958469
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Entry
105958469 CDS
T07346
Name
(RefSeq) 5'-3' exoribonuclease 4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
105958469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105958469
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
105958469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
105958469
NCBI-ProteinID:
XP_012837924
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MGVPAFYRWLADRYPKCIVDVVEEEPRNAANGAPLPVDVSRPNPNGIEFDNLYLDMNGII
HPCFHPEGKPAPATYDDVFKSIFDYIDHLVSLVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFDLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQ
CRLNSIPGWRFLKVILSDANVPGEGEHKVMSYIRLQRNLPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVINPPGHQEKCFLCGQGGHLAAECRGGTNDRIQDASGKFLDDIPIY
KKKYQFLNIWVLREYLGYEMDIPNPPFEIDFDRLVDDFVFLCFFVGNDFLPHMPTLEIRE
GAINLLMSVYRREFSAMGGYLTDAGEVFLERVEHFVQAVAVHEDQIFRKRTRIQQSYENN
EEMKLKARGETSLEPRPSAGDKVKLGEPGYKERYYSEKFGVSEPEKIDEIRMDVVLKYVE
GLCWVCRYYYQGVCSWLWYYPYHYAPFASDLKGLADLEITFFPGKPFKPFDQLLGTLPAA
SSTALPERYKQLMTDPASPIYNFYPTDFEIDMNGKRFAWQGIAKLPFIDENKLLGETKKI
ENTLTEEEKFRNTIMSDLLYVHPLHDLAAQITIYYRLCVMEKLPWTIDTIASGGMNGFMS
LTKRNSLRQVIPSPVNGFEDITNNLVLNITYLNPAPHAHIPKPPEGVKMPNKILRPIDIK
PLPALWHEDNRGRHQQVRERPQVSGAISGSVLGEAAYRLVNNSLNIKSDRTTNPRNFQGN
QLANRMRPAGPTGYERGQYGNERGQYGNERGQYVNERGQYGNERGQRGQYGYERGGAGRY
GYNEQGYYDDPNFVNGQYSPHAPPISSGANNTYGVPVNDRYTYQEQYPELRNGMSALTLE
GNFRSRPNSGQVSSSRSSNSGQPGQNTGGPLPSPPPKWIDRRGGGSGNAVMYSGQQQQSS
SLSGLHERQAKMVYQVKSKSAQDLLDSEFQQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcccgctttttaccggtggctggcagatcggtaccctaagtgtatcgtcgac
gtggtggaggaagaacctagaaacgccgccaacggtgctccactgcccgtcgatgtgtcc
aggccaaaccctaacggaattgagttcgataacttgtatttggatatgaatggtattatt
cacccatgtttccaccccgaaggcaagcctgcacctgccacttacgatgatgtatttaaa
tctatctttgattacatcgaccacctcgtgtcattggttcgtccgagaaagctcctttat
atggcaattgatggtgtggctcctagggccaaaatgaaccagcaaagatcgcgacgtttc
agggcagctaaggatgctgcagaagctgaagctgaagaagaaagattgaggaaagagttt
gaccttgagggggcaaaattattgcccaaagaaaagactgaaacatctgattcaaatgtc
atcacccctggcactccatttatggcagtgctctctgtagcccttcagtattatgtacag
tgtaggttgaacagcattcctggatggcgctttctaaaggttattctttctgatgcaaat
gttcctggtgaaggcgagcataaagtcatgtcttacattcgtttacagcgcaaccttcct
ggattcaatccaaatacaaggcactgcctatatggtctggatgcagacctgatcatgctg
tcactagctacacatgaagtccatttctcaatactgagggaggtaattaatcctcctggg
caccaagaaaaatgttttctctgtggtcaaggcggtcatctggctgctgaatgtcgtggt
ggaacaaatgaccgcattcaagatgcaagtgggaagtttttagatgatatccctatttat
aagaaaaagtatcagtttctcaacatttgggtattgcgagaatatttgggatatgagatg
gatattcccaatcctccatttgaaattgacttcgataggctggtggatgactttgtgttt
ctgtgtttctttgtcggcaatgactttcttcctcatatgcccacacttgaaattagagag
ggtgccataaatttgctcatgtctgtatatcggcgggaattttctgcaatgggtggttat
cttactgatgctggtgaggtattcttggagcgtgttgaacactttgttcaggcagttgca
gtgcatgaagatcagatatttagaaagagaactcgcatacagcagtcatatgagaacaat
gaagagatgaaactgaaagcaagaggagagactagtctagagccccgaccttcagccggg
gacaaggtgaagttgggggagcctggatataaggagaggtactattctgagaaatttggt
gtatcagaaccagagaagattgatgaaatcagaatggacgtggttttgaagtatgtggaa
gggctgtgctgggtttgtcgctattactaccaaggtgtctgctcatggctttggtactat
ccatatcattatgctccatttgcatctgatcttaaaggcttagctgatttggagataacc
tttttccctggaaagccatttaaacccttcgatcagctattaggaaccctaccagctgca
agttctactgctcttcccgaaagatacaagcaattgatgactgatcctgcatcacctatt
tataatttctacccaactgattttgaaattgacatgaacggaaagcgctttgcttggcag
ggtatcgccaaattgccattcattgatgagaataaactgcttggcgagacaaagaagatt
gagaataccttgacggaggaagagaaattccgaaatactatcatgtctgatttgctgtat
gttcatccccttcatgatttggcagcccaaattaccatttattatcgcctttgtgtaatg
gaaaaattgccgtggactattgatactattgcaagtggtggaatgaatggattcatgtct
ttgactaaaagaaatagcttgagacaagtgatcccttccccagtcaatgggttcgaagac
atcacgaataatctagttctaaatatcacttatcttaatccagctccgcatgctcacatt
ccaaagccacctgaaggtgtaaagatgcctaataagattttgaggcctattgacataaaa
ccattaccagcattatggcatgaagataaccgtggaaggcaccagcaagtcagagagaga
ccacaagtatctggggcaatatctggctctgtattgggagaagctgcttaccgtctggtc
aacaactcactgaacatcaagtcagaccggacaacaaatcctcgcaatttccagggaaat
caattagccaataggatgcggccagctggaccaactggctatgaaagagggcaatatggg
aatgaaagagggcaatatgggaatgaaagagggcaatatgtaaatgaaagagggcaatat
gggaacgaaagagggcaaagagggcaatatgggtatgaaagaggaggtgctggtcgatat
ggttataacgaacaaggatattacgatgacccaaattttgtcaatggacaatacagccct
catgctcctccaataagcagtggtgctaataatacttacggtgtccctgtaaatgataga
tacacatatcaggaacagtatcctgaactaagaaacggcatgtctgctttgacacttgaa
ggcaattttagaagcaggccaaattctggtcaagtatcatcttcgagatcgtcaaattct
ggtcaacccggtcagaacacggggggcccacttccctcaccgcctcctaaatggatcgat
aggcgtggtggtggatctgggaatgcagtaatgtacagtgggcagcagcagcagagttct
tcattgtctggactgcatgagagacaggctaagatggtctaccaggtcaaaagtaagtca
gcacaggatctgttggattcggaattccagcagtga
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