Elaeis guineensis (African oil palm): 105035562
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Entry
105035562 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04075
Plant hormone signal transduction
egu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105035562
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105035562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105035562
Transcription factors [BR:
egu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105035562
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
105035562
NCBI-ProteinID:
XP_073106774
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Position
1:complement(1141713..1145815)
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AA seq
707 aa
AA seq
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MPLSEFHQTRKVDTSQSKMTNCSSDLPSFMPDSEFVELLWENGQIVMHGQSNRPRKSFFS
TTFSRAQEKDSRDAVISKTGQIEAMDPLVNDFSPTEASGNAGLNAQDDDTVPWINYSIED
SLQNDYCQDYMLEFPGASLNSVSTHTETVLADRSHGFTQTSAKSSRNVEHGRTCEQLAGG
SDPSRIKCSQLFQLSPERRSSAPSMKSRATELSTRATSSTHHGLAGYLLSSRLEKQGLAS
STLSQSSGSIGLTNFSHFSGPAALAKANLLSLDRLRNNEKASTTTSSNPMESTSGFLATP
GLASAAPKVERRSTTKPQQERVSVEKPDADHDGNVHNNNSIVPDCVKRQSSGRNETEKGP
EAAVASSSVCSGNGAGAASNDPKHRAKRKNYEGEESGNQSEDHEDESMGLKKSATVRGTS
TKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQF
LTQIMSMGSGSCMLPLIPPAGIQQHMRMPPMAHLSQMGVGMGMGMRLGYGMGMLDMNGSA
SCPLLPLPPMHGPQFPFPSIPGTQGLHGMPGSTGLPMFGIPGQGLPASMPHIPPLGSPSG
LSATPDSMPGSAGMTNNPLPVTDTSPSSTSKDQHHRSLDXEKIQKTRTDDAQIKNSTQEA
KESVKKSALVQMSNQTLHATGNGVQAKKGVHPPAQLATVDSFQALAD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccgctctctgagttccatcagacaagaaaagttgatactagccaatccaagatgacc
aattgctcatctgatctgccttcttttatgcccgacagtgaattcgtcgaactgctgtgg
gagaatggtcagatcgtgatgcatggccagtccaacaggcctaggaagagcttcttctcc
accaccttctctagagctcaggagaaggatagcagagatgccgttatctcgaagaccgga
cagatcgaagctatggatccattggtgaatgatttctctcccaccgaggcctcgggtaat
gcaggtttgaatgctcaggatgatgataccgtcccctggattaattactcgatcgaggat
tctcttcaaaacgattactgccaagattacatgctggaattcccaggggcgagcctgaat
tctgtgtctactcataccgaaaccgtgctcgcggatagaagccatggtttcactcagact
tccgcaaagagttcacgtaacgtggaacatgggcgcacttgtgaacagcttgcaggaggc
tcggatcctagccggattaagtgcagccagttgtttcagttgtcgccggaacggcggagt
tcggccccgagtatgaagtcgagggcgacagagttgagcaccagagcaaccagtagtacg
caccatggtctggctgggtatttgctgagctcgaggctggaaaagcaaggtcttgctagt
tctacgttgtcacagtcaagcggtagcattggtttgacgaacttctctcatttctccgga
cctgctgcactggccaaagccaacctcctgagtctcgataggttgagaaacaatgagaaa
gcttccaccaccaccagtagcaacccgatggagtccaccagtggtttcttagcaactcca
gggttggcttcagcggcacccaaagtagagcggagatcaactacaaagcctcaacaggaa
agggtctcggtcgagaagccagatgccgatcatgatggcaatgtgcataacaataatagc
atagtgcccgactgcgttaagcgtcagagctcaggaaggaatgagaccgaaaagggtcct
gaagcagctgtagcatcttcttctgtgtgttcgggcaacggtgctggggcagcatctaat
gatcctaaacacagagcgaaaaggaaaaattatgaaggagaagaatccggtaaccagagt
gaagatcatgaggatgagtctatgggcctaaagaagtctgctactgtgcgaggcacaagc
acaaagcgaagccgtgctgcagaagtgcataatttgtctgaaagaaggcgaagggatagg
attaacgagaaaatgcgtgcacttcaagagctcatacccaactgcaataaggtggacaag
gcttcaatgctcgacgaggccatcgagtatcttaaatctctccagcttcaagtccagttc
ttgacgcagatcatgtcaatgggaagtgggtcatgcatgctccccttgattccaccggct
ggtattcaacagcacatgcgcatgcctcccatggcacatttatcacagatgggtgtaggc
atgggaatgggcatgagattaggttatggtatggggatgctagacatgaatggttctgca
agttgccctctacttccgcttcctcccatgcatggaccacagtttcctttcccctcaatt
cctggaacccagggtctgcatgggatgcccggttccaccggtcttccaatgtttggaatt
ccggggcaggggcttccggcatcaatgcctcacattccaccacttggttctccgtcaggc
ctttctgccacaccggactcgatgcctggctcagcagggatgactaataatccattacca
gtaacagatacatctccctcatcaacttccaaggatcaacatcaccgaagcctagacntt
gaaaaaatacagaaaacaagaaccgacgacgcgcagattaagaattctactcaggaagca
aaagaatcagtcaaaaagtctgccttggtgcaaatgagtaatcagacattgcatgctacc
gggaatggagtccaggccaaaaagggagtccacccaccagcacaactggcgacggttgat
tcatttcaggcactggctgattga
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