Elaeis guineensis (African oil palm): 105038012
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Entry
105038012 CDS
T03921
Name
(RefSeq) sm-like protein LSM3B isoform X1
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105038012
09123 Folding, sorting and degradation
03018 RNA degradation
105038012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105038012
03041 Spliceosome [BR:
egu03041
]
105038012
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105038012
mRNA degradation factors
5'-3' decay
Lsm complex
105038012
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105038012
Complex C
U2 snRNP components
105038012
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
105038012
NCBI-ProteinID:
XP_010911978
UniProt:
A0A6I9QN15
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Position
1:15332655..15338065
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AA seq
97 aa
AA seq
DB search
MASEEESTVREPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagaggagagcacggtgagggagcctcttgatctcataaggcttagcctc
gacgagcgcatctatgtgaagctccgctccgaccgagagctccgaggaaaactccacgct
tatgatcagcatctaaatatgatacttggagatgtggaagaggtaatcactactgttgaa
attgatgatgaaacttacgaagagattgttcggactaccagacgcactgttccatttctt
ttcgtcagaggagatggagtaatactagtttctccacctctgagaactgcatga
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