KEGG   Elaeis guineensis (African oil palm): 105038339
Entry
105038339         CDS       T03921                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03018  RNA degradation
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105038339
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105038339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105038339
   03041 Spliceosome [BR:egu03041]
    105038339
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105038339
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105038339
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105038339
 Complex C
  U2 snRNP components
    105038339
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 105038339
NCBI-ProteinID: XP_010912412
UniProt: A0A6I9QQJ3
LinkDB
Position
1:complement(106941706..106945614)
AA seq 97 aa
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILASPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgagcgaagaagagagcgccgtgaaggagccgctggacctcatcaggctcagcctc
gacgagcgcatttatgtcaagctccgctccgatcgagagcttcgcggaaaacttcacgct
tatgatcagcacctgaatatgatacttggggatgttgaagaaataattactactgtagag
attgatgatgaaacttatgaagaaattgttaggaccaccaggcgcactgtgccatttctt
tttgttagaggagatggagtcatactggcttctccgcctctgaggacagcatga

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