Elaeis guineensis (African oil palm): 105038339
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Entry
105038339 CDS
T03921
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105038339
09123 Folding, sorting and degradation
03018 RNA degradation
105038339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105038339
03041 Spliceosome [BR:
egu03041
]
105038339
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105038339
mRNA degradation factors
5'-3' decay
Lsm complex
105038339
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105038339
Complex C
U2 snRNP components
105038339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
105038339
NCBI-ProteinID:
XP_010912412
UniProt:
A0A6I9QQJ3
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Position
1:complement(106941706..106945614)
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AA seq
97 aa
AA seq
DB search
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILASPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagaagagagcgccgtgaaggagccgctggacctcatcaggctcagcctc
gacgagcgcatttatgtcaagctccgctccgatcgagagcttcgcggaaaacttcacgct
tatgatcagcacctgaatatgatacttggggatgttgaagaaataattactactgtagag
attgatgatgaaacttatgaagaaattgttaggaccaccaggcgcactgtgccatttctt
tttgttagaggagatggagtcatactggcttctccgcctctgaggacagcatga
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