Elaeis guineensis (African oil palm): 105040910
Help
Entry
105040910 CDS
T03921
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egu03036
]
105040910
03400 DNA repair and recombination proteins [BR:
egu03400
]
105040910
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105040910
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105040910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
Motif
Other DBs
NCBI-GeneID:
105040910
NCBI-ProteinID:
XP_073110524
LinkDB
All DBs
Position
3:111418662..111465668
Genome browser
AA seq
1650 aa
AA seq
DB search
MANRRSCKRALVEFLDGNDDNDAEKVYRFQILLPNGISTRIALHDPVEEMLIDEFIYHIR
KEVEKSAKTAHGERRRILWNEDIYLEDMHDNKIKKKLCFRHFKINKCHILRLHDGAGRSV
NTFQNMWDLTPDTDLLAELPAEYTFETALADLIDNSLQAVWSNGSGERRLVSVMINEQKI
VIFDSGPGMDGSDENSISKWGRMGSSNHRPSRQMAIGGKAPYLMPFFGMFGYGGPIASMH
LGRHAVVSSKTKESKKVYTLHLSRDALLNKSTHKCIWMTDGGIRDPLEEEIKISPHGSFT
RVEIQDLKIRFSDTFKLQCFLKDIYFPYIQCDEEHTSRKTTMPIEFQVNGTDLAEVQGGE
VAVTNLHSCHGPDFVLQLHFVLNQENIASKSPGSVVCRQANARLRCVYFPIVEGKESIER
IIEKLEEDGYGIKENFENFCRVSIRRLGRLLPDARWQPLPFMEAKQRKGDKGQLLKRCCK
RVKCFVETDAGFSPTPSKTDLAHHDPLTLALRNFGYKPSARESEAIIKIQKDGKPLNLSQ
LEKEYQDWIIQMHDRYDQEIDGGEDEPVLVINPCNKKKLGITSDVVRVHRAIRRKGLSWK
SGQKVKILKGAVGCPKNNLYATLEYILVEGFQGDVGGEACLICRPLGFPQEQGCSLILAD
GNASLDIQNSLSFPISVIDTGKFQAIDVTSWNFQLAKQKGKVPSAIDILTGKECCLLQID
GELPVEAPVTAGCVPPAEIVAVIRPESFIHSSSPNSLDQKYVLKDELEMSMKIRHMHESQ
GCQNVEFVHAEYMKPSSRNGIHGLYIYSLRQKHPDLFCKAGVYIFLFSVVCKDLSCKQLE
VRVTVKPDLRVQKWRVMHDDHGPLTDNSSLVVRVGSYISYLSVGCFDLYSNQIPFSSLPE
VVVKIYANKLVLVRVDKMKMVLSPNQLLLEITDMLIESHYLDMIRPSNEAMLEVSSQDRV
LSTTVACKVMPGPPSSVEMQSTPGLEKNLAPGKVIDKLVLEMFDAYGNHVEGGVEVSIHL
DGLRFQDHLGSIRKVNNQGCVTLSGLLKVAAGYGSKVCLSVFSDGKLVFEKMLQVVMREL
RVASGVPGYCKAGSHLENVVFEIFDSDGVVDETIHGQHHTLTIKSEPRKLDDTIQYTFQH
GRCIVPVIPVPQESGTFHIVAFHTHFPDLQTSIEIYVMQAPKLELATVTDLGASIYQSQF
SNDSISLVQESSECPSSQMDLFVQSIMDDAKKLDDGMAEVGLRIRERESKLKMLNDQKTQ
IGKEIYDLQGTPYYWLSRYATSISDPISGTMLVQHWYMCYWGWLGIPRMDASATLSPGLI
QYHILVLMGPQHSSQVDSLINAKEQITKQIEGKSDTAAAVFCNLSKAIQIQEPQKHFMED
VVGLVSLLGTVSNGNLSRIFAEYLGENYMLAIVCKSYEAASALEKYGEDGKVNRNSALHE
VAANLGITINRRFSVICLEEIRPYKGEIINNDPQRWLALPDPLLQSGETPAGFIGYAVNM
INLDIQCLNTRTAKGYGLRETLFYRLFGKLQVYQTREHMRVAKTCIKHGAISLDGGIMRE
NGIILLGDCEPEVVFPVIIFQSPMALSGNMIDVHKKMEEKKCFLEVIDEQMTKEIEAHAK
ELARFKKKSERLCEVLARKKILDDLLESPP
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagaaggtcctgcaaaagggctcttgttgaattcttggatggcaatgatgat
aatgatgctgaaaaagtgtacaggtttcagattctgttgccaaatggcataagtacgcgc
atagcacttcatgatccagtggaggagatgcttattgatgagtttatataccatataaga
aaggaggtggaaaaatctgcaaaaacggcacatggagaaagacggaggattctgtggaat
gaagacatatatcttgaagatatgcatgataacaagattaaaaagaaattatgtttcaga
cattttaaaatcaataaatgtcacatattaaggcttcatgacggtgcagggcgatctgtt
aatacttttcagaacatgtgggacttgacaccggacacagaccttctggcagaacttcca
gcagagtatacatttgaaactgcccttgccgacttgattgataattcattgcaggctgtg
tggtctaatggttctggtgaaaggaggcttgttagtgtaatgatcaatgaacagaagatt
gtgatttttgatagtggccctggaatggatggtagtgatgaaaactctatatcaaagtgg
ggaaggatgggttcatccaatcacaggccatccaggcaaatggctattggtggaaaagcc
ccatatttgatgcctttcttcggtatgtttggttatggcgggccaattgcttcaatgcat
ttgggaaggcatgctgtggtttcttccaagactaaagagtccaagaaagtgtatactctt
catctttcaagagatgctttgctaaacaaatctactcataaatgtatttggatgactgat
ggtggtattagggatcccttggaggaggaaatcaaaatatcacctcatggaagctttacc
cgggttgaaatccaagatctaaagattaggttctcagacacgtttaaacttcaatgtttt
ctgaaggatatctactttccatacatccagtgtgatgaagagcacacctcaagaaaaacg
accatgcctatcgaattccaggtgaatggcactgatttagctgaagttcaaggaggggag
gttgcagtcactaatctgcattcatgccatggtcctgattttgttttacaattgcatttt
gtgctaaatcaagaaaacatagcatccaagagccctggttcggttgtttgtcgacaagcc
aatgcacgattgagatgtgtttactttccaattgttgagggaaaagaaagcattgaaaga
attatcgaaaagctcgaggaagatggatatgggataaaagaaaactttgaaaacttctgt
cgtgtatctatacgtagacttggtcgtctacttcctgatgctagatggcaaccactacct
ttcatggaagcaaaacaaagaaagggggataaaggacaactgttgaagagatgctgcaag
agggtcaaatgctttgttgagactgatgctggcttttctccaacaccatctaagactgac
ttggctcatcacgaccccttaacactggcattgaggaattttggttataagccttctgca
agagaatcagaggcaattattaaaatacaaaaagatggaaaaccattgaatttgtcacaa
ctggagaaggagtatcaagattggataatacagatgcatgatagatatgatcaagaaata
gatggtggtgaggatgaacctgttcttgttattaacccttgcaataaaaagaagcttggc
ataacatctgatgttgtaagagtgcatcgagctattagaaggaaggggttatcatggaaa
tcaggccagaaggttaaaattcttaaaggagcagttggctgcccaaaaaacaatctctat
gcaacattagagtatatcttggttgaaggatttcaaggagatgtgggtggggaagcatgc
ctgatttgcaggcctttgggtttcccacaagaacaaggatgctctcttattttagctgat
ggaaatgcaagtttagacatacaaaattctctatcctttcctataagtgtaatagatact
gggaagtttcaagccattgatgttacttcatggaatttccaactggcaaagcagaagggg
aaggttccttctgcaattgacatactgactggtaaagaatgttgcctgcttcagattgat
ggggaactacctgttgaagctccagtaactgctggttgtgttcctcctgctgaaatcgta
gcagttattagaccagaaagttttattcattccagttctcctaatagcttagatcagaaa
tatgttttgaaggatgaactggagatgtctatgaaaattagacatatgcatgagagtcaa
ggttgtcaaaatgtcgaatttgttcatgcagaatacatgaaaccttcctcacgcaatggg
attcatggattatatatatattctctgcgacaaaaacatcctgatctcttctgcaaagct
ggtgtctatatatttttgttctcggttgtttgtaaggatttaagctgcaaacaactagaa
gtaagggtaactgttaagcctgatttaagggtacaaaagtggagagttatgcatgatgac
catggccctcttactgataattcatctctcgtcgttcgggttggttcttatatttcatac
ctttctgttggatgctttgatctatactcaaatcaaattccattctccagtcttcctgaa
gttgtggttaaaatatatgcaaataagcttgtacttgtccgtgttgacaaaatgaagatg
gtgctatcacctaatcagttgttactggaaatcacagatatgctgattgaaagccattat
ttggatatgattagacctagtaatgaagctatgttggaggtatcttcccaagatagagtg
ctgtctactacagttgcttgcaaagtcatgccgggtcctccatcctctgttgagatgcaa
agtactcctggattggaaaagaatttagctcctggcaaagttattgacaagcttgtgttg
gagatgtttgatgcttatggtaatcatgttgaaggaggagtagaagtctccatccatctt
gatggacttcgttttcaagaccacttgggttcaattcggaaggtgaacaatcaaggttgt
gtgaccctcagtggtctactgaaagtagcagctggctatggctcaaaggtatgtctttct
gttttttctgatggcaaattggtttttgagaagatgctccaagtggtgatgagggaattg
agagtggcgtcgggggttcctggctattgtaaagcaggttcccatttggagaatgttgtc
tttgaaatttttgattctgatggcgtagtagatgaaaccatacatggtcaacatcacaca
cttacaataaagtcggaaccacggaaattggatgacacaattcagtatactttccagcat
ggccggtgcatcgtgcctgttattccagttcctcaagaatccgggacattccacattgtg
gcttttcatacacatttccctgatctgcaaaccagcattgagatctatgttatgcaagct
cctaaattagagttagccactgtgacagatctgggtgctagcatctatcaatctcagttt
tcgaatgatagtatctcactcgtacaggaatcatcagaatgcccctccagtcagatggac
ctttttgtccagtcgataatggatgatgccaagaaacttgatgatggcatggctgaagtg
gggctgcggataagagaacgtgagagcaaactaaaaatgctcaatgatcaaaagacacag
attggaaaagaaatttatgatctgcaaggtactccatattactggttatcaaggtacgcc
acctcgatatcagaccctatatcgggtaccatgctggtacagcattggtatatgtgttat
tggggttggcttggtattccaagaatggatgcttccgctacactgagtcctggtttgata
cagtatcatatacttgttctgatgggacctcaacactcgagtcaggttgactcattgatt
aatgccaaagaacaaatcaccaaacaaatagaagggaaaagtgatactgctgctgctgtt
ttctgcaatctctccaaggccattcaaattcaagaacctcaaaaacactttatggaagat
gttgttggccttgtttcccttcttggaacagttagcaatggtaacctcagtaggatattt
gctgagtatttgggtgaaaattacatgcttgcaattgtctgcaagtcatatgaagctgca
agcgctttggagaagtatggtgaggatggaaaagttaatcggaattctgctctccatgaa
gtagcagctaatcttggaatcacgataaataggcgattctctgtgatttgccttgaagag
ataaggccatataaaggtgagatcataaataacgatcctcaaaggtggctcgcattgcct
gatccacttctacagtcgggtgagaccccagctggatttataggatatgcagtgaatatg
atcaaccttgacatccaatgcctaaatacaagaacagctaaaggttatggtcttcgggag
accttgttttatcggctgtttggaaagctgcaggtgtatcaaaccagggaacatatgaga
gtggccaaaacctgtataaagcatggtgcaatttctctagatggtgggattatgagagag
aatggaattattttgcttggagactgtgaaccagaggtggtatttcctgtcattattttt
caatctccaatggcactctcggggaacatgattgatgtccacaagaagatggaggagaaa
aagtgttttttagaagttattgatgaacagatgacaaaggaaattgaagcacatgcaaaa
gaactggccaggttcaaaaagaaaagtgaacgtctgtgtgaggttttggcaaggaaaaaa
attttggacgatcttttggagtctcccccctag
DBGET
integrated database retrieval system
