Elaeis guineensis (African oil palm): 105051048
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Entry
105051048 CDS
T03921
Name
(RefSeq) DNA repair protein RAD16 isoform X2
KO
K15083
DNA repair protein RAD16
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105051048
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
105051048
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
ResIII
Prok-RING_4
DUF3314
Motif
Other DBs
NCBI-GeneID:
105051048
NCBI-ProteinID:
XP_010929627
UniProt:
A0A6I9RN25
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Position
2:94570063..94582053
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AA seq
881 aa
AA seq
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MPRRSRNPRNGGKRRMKDPGFSDHDSFSASDSDFVIDLDDEEFEDNEEEAEPMPVPAPPP
PPPPAPAPAPSVGEIGGVGSDRRSKRRYLNRKSRGGKDKGKSPLFWEMWEEENEKWVDDF
LAEEIHREQWSCPRTEISLAETVEPSPDIILPLLRFQKEWLAWALKQEDSDIRGGILADE
MGMGKTIQAISLVLTARFLQTRTIGGATSSDMGSSSMSSLPRTKCTLVICPVVAVIQWVG
EIERYTKNGSTRVLVYHGAKRSNTDYDFNNFDFVLTTYSTIESDYRKHMMPPKLKCEYCD
KSFYPNKMKVHLKYYCGPYAQKTEKQSKQVSKKKKYSSADDEKCKGKRKEGHKRENQDEF
LSCSEDEKGKRKNKRDSKTRKQDKPAENTLGSSEGKSILHSWKWQRIILDEAHFIKDRRC
NTAKAVFALESLYKWALSGTPLQNRVGELYSLVRFLQILPYSYYFCRDCDCKFLDYRTST
CADCPHSTTRHFCLWNKCITKPIQNLSTFEEGRRAMILLRERVLKSIVLRRTKKGRAADL
ALPPRLVTLRRDTLDRNEQEFYEALYTESRIQFDTYVKAGTLMNNYAHIFDLLTRLRQAV
DHPYLVIYSKTAETPKGSKDDTVKDNCGICHDPAEDLVVTSCEHVFCKACLIDYSSALGN
VSCPTCSKHLTVDLTTKNSAEKLSQTTIKGYKRWGILNRLNHIGDFKSSTKIDALMEEIR
GMVENDGSAKGIVFSQFTSFLDLIGFSLQRSGIKCVQLVGSMSIPEREKAIQSFTDDVDC
KIFLMSLKAGGVALNLTVASYVFLMDPWWNPAVERQAQDRIHRIGQYKPIKSVRFVIEDS
IEERILKLQEKKELVFEGTIGNSSDAMGKLTEADLRFLFHI
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcagaagccggaaccctagaaatggggggaagcggcgaatgaaagacccgggc
ttctccgatcatgactccttctccgcttcggattccgatttcgtcatcgatttggacgac
gaggagttcgaagacaacgaggaggaagcagaaccgatgccggtgccggcaccaccgcca
ccgccaccgccggcgccggcgccggcgccgtctgttggagaaattggtggtgtcggaagc
gatcgacggagcaagcgaaggtatttgaacaggaagagcaggggtgggaaggacaagggg
aaatcccctttgttttgggagatgtgggaggaggaaaatgagaagtgggtggacgatttc
ctggcagaagaaatccatcgtgagcagtggagctgtccccggacagaaatttcgttggca
gagacggtggagccgtccccggacatcatccttcccctcctcaggttccaaaaagagtgg
cttgcctgggctttgaagcaggaggattctgacatcagaggggggattctggccgacgag
atgggcatgggcaagaccatccaagccatttccctcgtcctcactgcccgctttctccag
acgcgtactatcggtggggccacaagttctgatatgggctcttcctcgatgtcttcgctc
ccaaggaccaaatgcacccttgtcatctgccctgtggttgcggtgatccagtgggtgggg
gagattgagaggtacacaaaaaatgggagcaccagggtgctggtctatcacggggcaaaa
agatcgaacactgattatgatttcaacaactttgatttcgtactgacaacgtactcgacg
atcgagtctgactataggaaacacatgatgccgcccaagttgaagtgcgagtattgcgat
aagtcattctaccctaacaagatgaaggttcacttgaagtactactgtgggccttatgct
caaaagacagaaaaacaatcaaagcaagtgagcaagaagaagaagtattcatctgcggat
gatgaaaaatgtaaagggaagaggaaggaaggtcataagagagagaaccaagacgaattt
ctgtcttgctcagaagatgagaagggtaaaaggaagaacaagagagactccaagactagg
aagcaagacaagccagccgaaaatactttaggctcatccgaaggaaaatcaattctgcat
tcttggaagtggcaacgtattattttagatgaggctcatttcataaaagacagacgttgc
aatactgcaaaagctgtttttgctttagaatctctatataagtgggcattaagtggcact
cctctacaaaatcgagttggagaactttactcactggttcgctttttgcaaattcttcct
tattcatattatttctgcagggattgtgattgtaagtttcttgattatcgtacaagcaca
tgcgctgactgtcctcattctactacaaggcacttttgcttgtggaacaaatgtataacc
aagcccatacaaaatttatcgacatttgaagagggccgaagagccatgattttgcttagg
gagagagttctgaaaagcatagtgctaaggcgtacgaagaaaggcagagctgcagatctt
gcacttcctccaagacttgttaccttgaggagagatactctggacagaaatgaacaagag
ttctatgaagcattatatactgaaagccgtatacagtttgatacatatgtcaaagctgga
accttgatgaacaattatgcgcacatttttgatctccttacacggttgcggcaggcagtt
gaccatccatacctggtgatatattctaaaactgctgaaacacccaaaggaagcaaagat
gatactgtgaaagacaattgtggtatttgtcatgatccagcagaagatctggtggttacc
tcttgcgagcatgtattttgtaaggcatgtttgattgattactcttcagctctggggaat
gtatcatgtccaacgtgttctaaacaccttactgttgacttaacaacaaagaactctgct
gaaaagttgtctcaaacaaccatcaagggttataagcgctggggaatattaaacagactt
aatcatataggagactttaagtcgagtacaaaaattgacgcactgatggaagagataaga
ggcatggttgaaaatgatggttctgcaaaaggaatcgtattcagccagtttacatcattt
ttggatttgattggtttctccctccaaaggtctggcattaagtgtgttcagttggtggga
agcatgagtattcctgagagagagaaagctatacagtcattcactgatgatgtggattgc
aagatttttctcatgagcttgaaagctggaggggtggccctcaatctcactgtggcatca
tatgtttttttgatggatccgtggtggaacccagcagtggaacgtcaggctcaagatcga
atccaccgaatcgggcaatataagccaatcaaatctgtgagatttgtgatcgaggacagc
attgaggaacggatattgaagttgcaagagaagaaggagctggtgtttgaagggaccata
ggtaactcttctgatgccatgggaaagctaacagaagcagacttgcggtttttattccac
atttga
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