Elaeis guineensis (African oil palm): 105052955
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Entry
105052955 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105052955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105052955
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105052955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Big_2
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
105052955
NCBI-ProteinID:
XP_073100275
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All DBs
Position
10:16714989..16768479
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AA seq
1984 aa
AA seq
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MGFPVAAGGAAVLAVVVAAAALASLPPLVAREVSGPHIADLNVLLPPRMTNPVGYRLQGS
DGCFSWSWDHHDILSVQPEYNVSSRCSTSARLISIAPYNGRKETAVYATDLHSGITIRCK
VFIDEISRIQIFHHAIKIDLDELATLRIRAFDDEENVFSSLVGLQFLWKLVPKAFEDDNS
HYLVHVPLKETPLSDCGGFCGDLRTQIELEDRNVGSDLYVVKGIGIGHEVVSAQLLEPKL
EHVMDTIVLTVAEAMSLDPPSPVFVTVGALIYYSLRVIRLNAAQVIELPSPHHRWYVTNS
SVARVDSMMGIAHALNLGITNIIVEDSRVSDHVQISSFHVVTPDKLCLYMVPVTNASAPL
DGAAPIPSSVVWYVFPGQEYIIDIKVFAGGPDGNQIHITENNDLKLESDTLRYWDLFSVS
KDVAIKYNWQNSRLLKPVSPGRGYLTASLTYERGNSEMAEVLKVVQEVNVCNKVKFIFGE
DNEYFQIIHLPWAPGVYQEAQLKATGGCGKTLQDYKWSSSDKATVSISASGAVKAKRPGQ
VIIRVVSVFDSMNYDEVVIEVSVPSSMVMLPIFPVEVVVGTEIQAAVTLKTSTGVYFHKC
DAFSSFVRWKVFSAGECFRVIDKTGKAWTSDMLPHTEGSKPLYGYPCAWTYLYASGAGRA
MLHATLSSESQSSFQFLDGPIILKAASPIAAYYPLVVYQAQNGNHFGGYWVDLSRIFAGI
QDSDGTSLNELYLVPGSGMDVLLLGGPERWDHGVDFVETVNILGEPNSSAINSVIVQQAS
SSGGRQYKIXCQSLGNYKLLFSRGNLVGADHPMPAIAKVELSVICSFPSSIVLLANEAAN
TLDTIEAASNADRGPGRLRTAPVIVSNGCTIRLAAVGIHKTRRAFANSSSLCLRWELSGC
KDLAHWSDTNSFERSEATWERFLVLHNASGVCTVRATVVGFPETMASHLYEKAFSWLERA
EAVLTDAIHLQLVSSLRVVPEFVLLVLDPEAKVNLSVTGGTCFLDAVTNDTEVAFIIQPP
ESTQCSHLIVGARGLGSALVTVRDIGLSPPAAASALVRVADVDWIKIIPEQELSLMEGTT
ERFDILAGTHDGCIFDSSQYMYMKIKVHLEDGILELISENYSPVNGEWVVFGPKFSVRAL
NIGITTLYVSVKQKSGYELLSQLVKVEVYKPLQLHPEYIYLVPGASYLLTVKGGPKIGAS
VEYASMNEGIAVVQKSSGKLSASSIGNATVQAAIYGNGGILICEAYGRVEVGIPSAMTLN
LQSDQLCVGCKMPVFPTIPEGDLFSFYEICKDYKWMVENEKVVSFETATSLHSDVHKASS
SCLGNNHPCYSDDRDDGFINVLIGRSAGKARVSISVSCDFVLNGHPQPVSYNASKSLMVV
SDPPLALGIPITWVLPPFYTSSELLPRSSDSYGQVDSHKHKATTYSMLRACEGNGLLRQE
GITIDGSKIRTKESNDLDCIEANDRSTGRTVIASCVRTAQVSQVRVTTPESSFHMAYLPV
DAKMELIISYADDLGYPFSEAFGVVPLDIETNNPDVVSAFMSKADDSMHGSSEHVTLQAK
RPGKALVRLSINRNPRKADFMLVSVGARLFPRNPVLHVGRYLNFSVLGDGLDGLRSGQWL
TSNESVLSVNRITGESHARDQGTAEGMNLKLQTTVTVLKVEQIIVDAPTETLTNIQFPPN
GHKFLVRFSDSLDYKFEAPRNQLEVPYDCKVDPPYVGYAKPWSDHVAGNSYCLFFPYSPK
RLMSLMSKSNVRLEETTSNGGFIYVSIIASLREAPSIMGSAHAPFVGGFSIAVVGKVNLT
PDSNKSLITVMGNTDVEVYWNAKDLLMVSPISIVGFGFGGHAEYEVKVLKNQRFTDKITI
VLPATGQTEEIDVSYELGERTAPAGISEITWSAIVVCAVVLMLTVIIFMRLLDKPARSTP
VRQGAPAASSVVVGPLTPDRTSAGTVRSSPHTPQRFMEYVRRTIDETPYYNREGRRRFDP
QYTY
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgggattcccggtggcggcaggaggtgccgcagtgctggcggtggtggtggcggcggcg
gctttggcgtcgcttccaccgttggtggcgcgggaggtgtcggggccccacatagcggat
ttgaacgtgctgttgcctccccgcatgactaaccccgtcgggtaccgccttcaaggaagc
gacggctgcttttcttggtcatgggatcatcatgatattttatctgtgcagcctgagtat
aatgtcagtagtaggtgctcaacaagtgctcgattgatatcgattgccccttataatggt
agaaaggagactgcagtttatgctactgatctccatagtggaatcacaattcgctgtaaa
gtttttattgatgaaatatcccgaatccagatattccatcatgctattaaaattgaccta
gatgaacttgccacactgcgtattcgcgcctttgatgatgaagaaaatgtgttttcatca
ctggtaggattacagtttctgtggaaacttgttccaaaagcttttgaagatgataacagc
cattatcttgttcatgttccattaaaggaaacaccactaagtgactgtggtggtttctgt
ggtgatctacgtacacaaatagagcttgaagacagaaacgtaggttcagatttgtatgtt
gtgaaaggaattggaattggccatgaggttgttagtgcccagttgcttgaaccaaaactt
gagcatgtgatggatacaattgttttaactgttgctgaagctatgtcactagatcctcca
tcacctgtctttgtcactgttggtgctctgatatactacagtctgagggtgattcgtctg
aatgctgctcaagtgattgaattaccatctccgcatcatcgatggtatgtcacaaactct
tcagtggctcgggtggacagtatgatggggattgctcatgccttgaatcttggaatcaca
aatatcattgtcgaggactctagagtctctgatcatgtgcagatatcatcttttcatgtt
gtcaccccagataaactgtgtctatacatggtgcctgtgaccaatgcttctgctcctctt
gatggggcagcacccattccttcctcggttgtttggtatgtttttccaggccaagaatac
atcattgacataaaagtttttgccgggggacctgatggaaatcaaatacacatcacagag
aacaatgatcttaagttggaaagcgatactcttagatactgggatttattctctgtgtcg
aaagatgtagctattaaatacaactggcaaaattctagattgctcaaaccagtttctcct
gggcgaggatatctgactgcttctctaacttatgagagaggaaattcagaaatggccgag
gttctcaaagttgtccaagaagttaatgtttgcaacaaagtcaagttcatttttggtgaa
gacaatgagtacttccaaattattcaccttccttgggctcctggggtctatcaggaagct
caactaaaggcaactggaggttgtggcaaaacattgcaagattataaatggtcttcttct
gacaaggcaactgtttcaatatctgcttctggtgctgtgaaggcaaaaaggcctggtcaa
gtcataattagggtggtttcagtttttgattcaatgaattatgatgaggtggtcattgaa
gtttccgttccttcgtctatggttatgctgccaatctttcctgtggaggtggttgtagga
actgaaattcaagctgctgtgacattaaaaacatcaactggtgtctactttcacaaatgt
gatgcttttagttctttcgtgaggtggaaagtgttttctgccggtgaatgcttcagagta
attgataaaacagggaaggcatggacttcagatatgctgcctcacactgagggctctaag
ccactatatggctacccctgtgcatggacatatctgtatgcttctggtgctggtcgagcc
atgttgcatgcaacactgtcctctgaatcacagtcttcttttcagttcttggatggacca
atcattctaaaagcagcttcacctatagccgcatattacccacttgttgtttatcaggcg
caaaatgggaatcactttggtggttattgggttgatttgtctagaatatttgctgggatc
caggattcggatggtacaagtctgaatgagctgtatcttgttcctggatcaggaatggat
gtgctgttacttggagggcctgaaagatgggaccatggggttgattttgtagaaactgta
aatattcttggtgaaccaaattcgtcggcaatcaattctgtcattgtgcagcaggcatcc
tccagtggtgggagacagtacaaaattntttgtcaatcattggggaattataaactgctc
ttttcacgtggcaatttggttggtgctgatcatcccatgccagctatagcaaaagtggaa
ttgtctgtaatttgtagctttccttcatccatcgtgctccttgctaatgaagctgcaaat
acacttgataccatagaggctgcaagcaatgctgatcgtggtccaggaagactccgaact
gctcctgttatagtctccaatggatgtaccatacgtctagcagctgttggtattcataag
actagaagagcttttgcaaactcatcatctctttgcttgaggtgggaactgagtggttgc
aaagacttggcgcattggagtgacactaacagttttgagagatctgaggccacttgggag
aggtttctggttttacacaatgcatcaggagtgtgtaccgttcgtgctacagtagttggt
tttcctgaaaccatggccagtcatctttatgaaaaagcattttcatggctagaaagagca
gaagctgttctcaccgatgccatccatttgcagctggtttcttccttgcgagttgtacca
gagtttgtcttattagttttggatcccgaagcaaaggtaaatctgtcagtcactggggga
acctgtttcctggatgctgtaacaaatgatacggaagttgcatttattatccaaccgcct
gaaagtactcaatgttcacacttaattgttggtgctagaggcttgggttctgctctagtg
acagttcgtgatattggactttctcctcctgctgctgcttctgccctggttagagtggca
gatgttgactggattaagataattcctgaacaagaactaagcctaatggagggaaccacc
gaaagatttgatattttagcagggacacatgatggatgtatctttgactcttctcagtac
atgtacatgaaaatcaaagtgcatcttgaggatggcatactggaactcattagtgagaac
tattctccagtaaatggtgaatgggtagtcttcgggccaaaattttcagttagagctttg
aatattggtattacaactctttatgtcagtgttaagcagaaatctggatacgaactatta
agtcaacttgttaaggtggaagtttacaaaccactacaattacatccagaatatatatac
cttgtacccggagcttcttatctgcttactgtgaaaggtgggccaaaaattggtgcttct
gttgagtatgctagcatgaatgaaggaattgcagtagttcaaaaatcctcgggaaagctt
tctgcaagttccataggaaatgctactgtccaggcagctatctatgggaatggaggtatc
ttgatttgtgaagcatatggaagagttgaagtggggatcccatcagcaatgactttgaat
ctgcagagtgaccagctttgcgttggttgcaaaatgcctgtctttccaaccattcctgag
ggggatttattttccttctatgagatctgtaaagattacaagtggatggtagagaatgaa
aaggtggtgagctttgaaacagccacatctttgcattctgatgtgcacaaagcctcatca
tcttgcttaggaaataaccatccatgctattcagatgatagggatgatggatttatcaat
gttttgattggcagatctgcaggcaaagcaagagtttccatttcagtttcttgtgatttt
gttttaaatggtcatcctcaaccagtgtcttacaatgcatccaagtcattgatggtggta
tctgatcctcctctggctcttgggatacctataacctgggtcctcccacccttctatacc
tcatcagagcttttgcctagatcttcggactcatatgggcaagtagactcccataagcat
aaagctactacttactctatgctgagggcatgtgaaggaaatggccttttaagacaggag
ggtattactattgatggaagtaaaattagaacaaaagaaagtaatgatcttgattgtatt
gaagcaaatgaccgatcaacaggaagaacggtgattgcatcttgtgtaaggactgctcag
gtgtcacaagtaagggtaaccacaccagaatcttctttccacatggcttaccttcctgtc
gatgccaaaatggaattgattattagctacgctgatgatttaggatatccattctctgag
gcatttggtgtggttcctttggatattgaaactaataatcctgatgttgtatctgctttc
atgtcaaaggctgatgatagcatgcatggcagcagtgaacatgttactctacaggcaaag
aggcctggtaaagctcttgtaaggttatccatcaatcgtaatccaaggaaggcagacttc
atgctggtatcagttggtgcgcgattgtttcctagaaatccagttctacatgttggacgc
tatcttaatttttctgtacttggagatggtttggatggccttcgatcaggtcaatggtta
accagtaatgaaagtgttctatcagtaaatagaatcactggagaaagtcatgctagggat
caaggtacagctgaaggtatgaatttgaaattgcaaacaacagttactgtgctgaaggtt
gaacaaataatagtcgatgctccaacagagacgttgactaacattcagtttccacccaat
ggtcacaagttcttggtgaggtttagtgattccctggactacaagtttgaagctcctaga
aaccaacttgaagtcccatatgactgtaaggttgacccaccttatgttggatatgcaaag
ccatggagtgatcacgttgctggtaattcatattgcctctttttcccatactcaccaaaa
cgtttgatgagtttaatgtccaagtcaaacgtgagattggaagagactactagcaatgga
ggatttatatatgtttccattattgcatcattgagagaagccccatccattatgggatct
gcacatgcaccgtttgttggaggattctcaattgcagtagtagggaaggtcaatttgaca
cctgactccaataaaagcctgataacagtcatggggaatacagatgtggaggtatactgg
aacgctaaagatttgttgatggtaagccccattagtatcgttggatttggttttggaggc
catgctgagtatgaggtcaaagtccttaaaaaccaaagattcacagataaaatcaccatt
gtacttcctgccactggtcagacagaagaaattgatgttagttacgagcttggagaaaga
actgctccagcggggataagcgagatcacgtggtctgcaattgtagtctgtgcggttgtc
ttgatgctcacagtcattatcttcatgaggttgctcgataaaccagccagatccacacca
gtcaggcagggggcccctgctgcctcatcagttgttgtgggccctttgacacctgaccgt
acctcagctggtactgttcggtcctctccgcataccccccagcgtttcatggagtatgtg
agaaggacaattgacgaaactccatactataaccgagaagggaggaggagatttgaccct
cagtatacctactga
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integrated database retrieval system
