Elaeis guineensis (African oil palm): 105059744
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Entry
105059744 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04075
Plant hormone signal transduction
egu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105059744
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105059744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105059744
Transcription factors [BR:
egu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105059744
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GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
105059744
NCBI-ProteinID:
XP_010941465
UniProt:
A0A6I9SE22
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Position
10:20490785..20494757
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AA seq
666 aa
AA seq
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MPLSEFHRPMTKDKPEATPSRVNNCSSDLFSMPDPDFAELLWENGQVVMQGHSSRPKKSS
FPTSFSSHASGVEEKDHRDVDVPKTSRYYAMDPMINDFSPSRPSADVGVNAQDDDMVPWI
NYPTEEPLPDDTLQNDYCLEFLNEFMGANLNAHSASSKPMPADRSSGLGQHAPKALTESK
SSEPSRVRTSQLFQMLQHSQSSAPSSKSGGMDKGIGDGARTLLQSKNPAGPKPLQLNGSG
MLNFSHFSRPAMLAKANLHGVDRPRSNEKLSAPSNSNPVESTLMESTSCFQGAAGVRGRS
TSGPHKMELQSSAKTPQEVISAEHSQAICQQDASRKNIPNILTNNCSRLPDQLASSSIMA
SVALRRQETEKAPEAVVASSSVCSANGAGAASNDPKQQEKRKSREGEESGYQSDDFEDVS
VGLKKPAPGRGTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLEEA
IEYLKMLQMQVQIMSMNSGLCMPPMLLPPGMQHMHVPAMARFLPTGVGMGMGMGLGYGMG
MYDMNGSPSCSMIHVPAFHGPQFPCPSIPGPLGLHGXPGSVNHQMFGVPAHGFPLSMPRP
SSSGISVKANSVPEITAPMTCAIPGSDAAPASISEDQQHQNVETSPRSNTDNSQIQNPNQ
EVKEPF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctccgaattccatcggccgatgacaaaggataagccggaagccacgccatca
agagtgaacaattgctcatccgatctattctccatgcctgatcccgactttgccgagcta
ctgtgggagaacggccaggttgtgatgcagggtcattccagtaggcctaagaagagctcc
ttccctactagtttttcttcccatgcttctggagttgaagagaaggatcacagagatgtc
gatgttccaaagacttcaaggtattatgcaatggacccaatgattaatgacttctcgccg
tcgaggccttctgccgacgttggtgtcaatgctcaagatgatgatatggtcccatggatc
aattacccaactgaggaacctctcccggatgatactcttcagaacgattactgcttggag
ttcttgaatgaattcatgggggccaatctgaatgctcattctgcctccagcaaacccatg
cctgccgacagaagcagtggcttgggccaacatgctccaaaagcacttacagagagtaaa
agttcagagcctagtagagtgaggaccagccaattgtttcaaatgttacagcattcccag
agttcagctccaagttccaaatcaggagggatggataaagggatcggtgatggtgctaga
acccttttgcagagcaaaaatcctgcaggtcccaagccactgcagctgaatggtagtggc
atgctgaatttctcccatttttcaagacctgctatgctggcaaaggccaatctccatggt
gttgacagaccgaggagcaatgagaagctgtccgctccttcgaatagcaatcctgtggag
tcgacattgatggaatcgaccagctgttttcagggtgctgctggggttcgaggcagatca
acttcaggtcctcacaagatggagttgcagtcctctgccaagactccccaagaggtgatc
tctgccgagcattcgcaggctatctgtcaacaagatgcttcaaggaagaatatcccaaat
atccttactaataattgtagtagactccccgatcagctcgcgagctcgagtatcatggca
agtgtggccttaagaaggcaggaaactgaaaaggctcctgaagcagttgttgcttcttct
tccgtgtgttcagctaatggtgcaggagcagcatccaatgatcctaaacaacaagaaaag
aggaaaagtcgcgaaggagaagaatcagggtaccaaagtgatgattttgaagatgtgtcg
gtggggttgaaaaaacctgcaccaggacgagggaccagcacaaagagaagtcgcgctgca
gaagtacataatttatcagaaagaaggcgaagagataggattaacgagaaaatgcgtgca
ctacaagagcttatacccaactgcaacaaggcggacaaagcttcgatgcttgaagaggcc
atcgagtatcttaagatgcttcagatgcaagttcagatcatgtccatgaatagtggttta
tgcatgcctccaatgttgctacctccaggtatgcagcatatgcatgtgccagccatggct
cgtttcttgccaacaggcgtagggatgggcatgggtatgggacttggctatgggatggga
atgtatgacatgaatggctcccccagttgctcaatgatccatgtgccggcctttcatgga
ccgcagttcccgtgcccttcaattccagggcctctgggcttgcatggcntgcctggatct
gtcaatcatcagatgtttggagtcccagcgcatggcttccctttatcgatgccccggcca
tcgtcatcagggatttctgttaaggcaaactcagtgcctgagattacagcaccaatgact
tgtgccattccaggttcagacgcagctcctgcttcaatttctgaggatcaacagcaccaa
aacgtggaaacgtcaccaagatcaaacaccgacaactcacagattcagaatcctaatcag
gaagtgaaggaaccattttag
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