Elaeis guineensis (African oil palm): 105060509
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Entry
105060509 CDS
T03921
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105060509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105060509
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105060509
Complex C
U5 SnRNP specific factors
105060509
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFL1
EFG_III
Roc
EF-G_D2
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
105060509
NCBI-ProteinID:
XP_010942549
UniProt:
A0A6I9SEU1
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All DBs
Position
1:164954846..164961720
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AA seq
995 aa
AA seq
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MDESLYDEFGNYIGPEIESDRDSDDAGDSGDESPAGSARSDDEADATPSPSANGWITASG
AGADDMDTDPAASQIVLAEDKKYYPTAEEVYGEGVETLVMDEDEQPLEQPIIKPVRTVKF
EVGVKDSSTYVSTEFLLGLASNPSLVRNVALVGHLHHGKTVFMDMLVEQTHEISTFDPDS
ERHMRYTDTRIDEQERRISIKAVPMSLVLEDSNAKSYLCNIMDTPGHVNFSDEMTAALRL
ADGAVLVVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPTDAYFKLRHT
LEVINDLISSFSTSVGGTQVVDPAAGNVCFASASAGWSFTLQSFAKLYVKLHGIPFDYSK
FAASLWGDLYYHPNERVFRKKPPMGGGERSFVQFILEPLYKIYSQVIGEHKKSVEATLSE
LGVTLSNAAYKLNVRPLLRLACSSVFGSATGFTDMLVQHIPSAKDAAAKKIEHIYTGPQD
SYIAEAMKDCDPYGPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTLRVLGEGYSPDD
EEDMTVKEVTKLWVYQARYRIPISKAPAGSWVLIEGVDASIMKTATLCPLDMDEDVCIFR
PLRFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGEIYLD
SIMKDLRELYSEVEVKVADPVVTFCETVVETSSMKCFAETPNKRNKITMIAEPLERGLAE
DIENGVVSIDSKQKDISDFFQKRYDWDLLSARSIWAFGPDKQGPNILLDDTLPSEVDKNL
LSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNASIAAEPLHRGGGQIIPTARRVVYS
AFLMANPRLMEPVYYVEIHTPIDCVSAIYTVLSRRRGHVTADVPKPGTPVYVVKAYLPVI
ESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTR
RRKGMSEDVSINKFFDEAMMVELAQQAADLHLQMM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagcctctatgacgagttcggcaactacatcggcccggagatcgagtccgac
cgcgactctgacgatgctggggattccggcgacgagtctcctgccggctccgcccgctcc
gacgacgaggccgacgccacacccagcccctccgccaatggctggattaccgcctccggc
gccggtgccgacgacatggacaccgaccctgccgcctcccagatcgtcctcgccgaggac
aagaaatactaccccaccgccgaagaggtctacggcgagggcgtggagaccctggtgatg
gacgaggacgagcagcccctcgagcagcccatcatcaagcccgtccgcaccgtcaagttc
gaggtcggcgtgaaggactcctccacctatgtctccaccgagttcctcctcggcctcgcc
tccaacccttctcttgtccgcaacgttgctctcgtcggccacctccaccatggcaagacg
gtgttcatggacatgctggtggagcagacccacgagatctcgaccttcgatcccgacagc
gagcggcatatgcggtacacggacaccaggatcgacgagcaggagcgccggatttccatc
aaggccgtgcccatgtccctcgtgctcgaggacagcaacgccaagtcctatctctgcaac
ataatggacactcccggccatgtcaacttctctgacgagatgactgctgctctccgcctc
gctgatggggctgtgctggttgttgatgccgccgaaggtgttatggtaaatactgagagg
gctatacgccatgcaatacaagaaagacttcctattgtagttgtgataaacaaggttgat
agactgattacagagcttaagctgcctccgactgatgcttatttcaaactgcgacacact
ttggaagttatcaatgaccttatctcttctttctccactagtgtaggaggcacccaagtg
gttgatcctgctgctgggaatgtctgtttcgcaagtgcaagtgctgggtggtcattcacc
ttgcagtcatttgctaagctttatgtaaaactccatggcattccttttgactattcaaag
tttgcagccagtctatggggagacctgtattatcatcctaatgaaagggtcttcaggaag
aaacccccaatgggtggaggagaaagatcatttgtccagtttattctagaacctttatac
aaaatctacagccaagtaattggagagcataagaagagtgtggaggctactctctcagaa
cttggtgtaaccctgagcaatgccgcttataagttgaatgttaggcctttattgaggttg
gcttgtagttctgtctttggatctgcaacaggcttcactgacatgcttgtccagcacatc
ccctctgcaaaggatgctgcagcaaagaagatagaacacatatatacaggacctcaagac
tcatatattgccgaggctatgaaagactgtgatccttatggcccccttatggttaatgtt
acaaaactctatccaaagtctgactgtagtgtctttgatgcctttggccgagtttacagt
ggcaccatacagactggtcagaccttacgtgtacttggggaaggctattcacctgatgat
gaagaagacatgacggttaaagaggttaccaaactgtgggtttaccaggctcgataccgt
attcccatcagtaaagcacctgctggttcttgggttctaattgaaggtgtagatgcctcc
atcatgaagactgcaacattatgtcctttggatatggatgaagatgtttgcatatttagg
cctcttcgcttcaatacactgccagttgtaaaaactgcaaccgaaccattgaatccaagt
gagctaccaaagatggttgagggccttaggaaaatcagtaagagttatcctctagctatc
accaaagtagaggagtcaggagaacacactatactaggaacaggtgagatatatcttgat
tccatcatgaaggatctcagagagctttactctgaagttgaagtcaaggtggcagatccg
gttgtgactttttgtgaaacagtggttgagacttcctcgatgaaatgttttgctgaaact
cccaacaaaagaaacaaaattaccatgattgcagagccactagagaggggtttggcagaa
gatatcgagaatggtgttgtgagcattgactcaaaacaaaaggatatcagtgatttcttt
cagaaacgttacgattgggatttgctttcagcaaggagcatatgggcatttggaccagac
aagcagggccccaacattctattagatgataccctcccaagtgaagttgataagaacttg
ctgagtgctgtcaaggactccattgttcaaggatttcagtggggtgcccgggaaggtcct
ctttgtgacgaacctatccggaatgtcaaattcaaaattctaaatgcatctattgctgct
gagcccttgcatcgaggaggtggtcagattattcccaccgctcggcgtgtggtgtattca
gctttcctcatggcgaacccgaggcttatggagcctgtttactatgtagagatccataca
ccaatcgattgtgtctctgcaatctatacagtattgtcacgcagacgtggacatgtaaca
gcagatgtccctaagcctggcacccctgtatatgtagtgaaggcatatttaccggtgata
gaatcatttggctttgagacggacttgaggtaccatactcaggggcaagcattttgcctc
tcagtgtttgatcactgggccatagttcctggtgacccacttgataagagcatagtcctc
aggcctctagaaccggcaccgattcagcaccttgctcgtgagttcatggtgaaaacaagg
cgccggaagggaatgagtgaggatgtgagcatcaacaagttctttgatgaggctatgatg
gttgagcttgctcagcaggctgcagatcttcatttgcagatgatgtag
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