Egretta garzetta (little egret): 104125644
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Entry
104125644 CDS
T05152
Symbol
SLIT1
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104125644 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
egz00536
]
104125644 (SLIT1)
Glycosaminoglycan binding proteins [BR:
egz00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104125644 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
Laminin_G_2
Laminin_G_1
LRRCT
LRR_9
LRR_1
LRR_14
EGF_TEN
hEGF
EGF_Teneurin
EGF_4
EGF_2
LRRCT_2
FNIP
LRR_NXF1-5
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104125644
NCBI-ProteinID:
XP_009636410
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
DLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPV
SSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCAAPAQLRGLNVAEIQK
NEFSCSGQTDPARVQLCSLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLEL
NGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFG
GLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ
NPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGT
EDYQLNSECNSDVICPPKCRCESNVVECSNLKLTKIPERIPQSTAELRLNNNEISILEAT
GIFKKLPHLKKINLSNNKVSEIEDGAFEGASSVSELHLTVNQLESVRSGMFRGLDGLRTL
MLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQ
LAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEETSCIPRPQCPQEC
TCLDTVVRCSNKHLKALPKGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNKISS
LSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISSLPEGIFADVTSL
SHLAIGANPLYCSCNLRWLSSWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPP
SLSVQAKCNPCLSSPCQNQGTCNNDPLGFYRCACPSGYKGRDCEVALSGCSSTPCANGGP
CQPQEGEGAGFRCLCPAGFEGLSCRTASDPCKDHGCKNGGSCVPGATNYTCLCPALYAGD
FCEQPPDFCSAELSPCQHGSTCVSTSQGPRCECAPGYVGSNCSEDFDDCQDHRCQNNARC
LDEVNGYSCLCTEGYRCLCPAGFEGLSCRTASDPCKDHGCKNGGSCLLSVNFVDRDTYLQ
FTDLQDWPRANITLQVSTAEGNGILLYNGDSDHMAVELYQGHVRVSYDPGTHPSSAIYSA
ETINDGQFHTVELVTFDQMVNLSIDGGSPMTMDNSGKHYTLNSEAPLYVGGMPVDVNSAA
FRLXAANGTRSPGSTRNLYINNELQDFTKTRMTPGVVPGCEPC
NT seq
3553 nt
NT seq
+upstream
nt +downstream
nt
ggacctgagtgagaacttcatccaggccatccccaggaaggctttccgtggggccactga
cctcaagaacctgcaactggacaagaaccagatcagctgcatcgaggatggggctttccg
tgccctgcgggggctggaggtcctgaccctgaataacaacaatatcacttccatccctgt
gtccagcttcaaccacatgcccaagctgcggacgttccgcctccactccaaccacctctt
ctgcgactgccacctggcctggctgtcgcagtggctgcgccagcgccccaccatcgggct
cttcacccagtgcgccgctccagcccagctccgcggcctcaacgtggctgagatccagaa
gaacgagttcagctgctctggacaaacagacccggcacgtgtccagctctgcagcttgtc
ctctggctcctgcccggccatgtgcacttgcagcaacggcatcgtggactgtcggggcaa
ggggctgacggccatccctgccaacctgcctgagaccatgacggagatacgcctggagct
caatggcatcaagtccatccccccaggcgctttctccccctacaagaagctgcggaggat
agacctgagcaacaaccagatctcagagatcgcccccgacgccttccagggactgcgctc
actgaactccctggtgctgtacggcaacaagatcacggatctccccaagggtgtcttcgg
gggactttttgccctgcagctgctgctcctcaacgccaacaagatcaactgcgtacgggc
ggatgccttccaggatctgcagaacctctcgctgctttccctctacgacaacaagatcca
gagcttggccaagggcaccttcacctccctgcgggccatccagaccctgcacctggccca
gaatcccttcgtctgcgactgcaacctgaagtggctggcagacttcctccgcgccaaccc
catcgagaccagcggcgcccgctgtgccagcccccggcgcctggccaacaagcgcatcgg
ccagatcaagagcaagaagtttcgctgctctgccaaagagcagtatttcatcccaggaac
agaggattaccagctgaacagcgagtgcaacagcgacgtgatctgccccccgaagtgccg
ctgcgaatccaatgtggttgagtgctccaacctgaagctcaccaagatccccgagcgcat
cccacagtccacggccgagctgcgcctgaacaacaacgaaatctccatcctggaggccac
cggcatcttcaagaaactcccacatctgaagaaaatcaacctcagcaacaacaaggtgtc
ggagatcgaggacggggcattcgagggggcatcctccgtcagcgagctgcacctcaccgt
caaccagctggagtcagtgcggagcggcatgttcaggggcctggatgggctgaggaccct
gatgctgaggaacaaccgcatcagctgcatccacaacgacagcttcacggggctgcgcaa
cgtccgcctgctctccctgtatgacaaccagatcagcaccatcgcgccgggtgcctttga
cacgctgcagtccctctccacgctgaacctgcttgccaaccccttcaactgcaactgcca
gctggcctggctgggggactggctgcgcaagaggaagatcgtgacggggaacccgcgctg
ccaaaaccccgacttcctccggcagattccgctccaggacgtggccttccccgacttcag
gtgtgaggaaggtcaggaggagaccagctgcatcccccggccccagtgcccacaggagtg
cacttgcctcgacaccgtcgtccgctgcagcaacaagcacctcaaggccctgcccaaggg
gatccccaagaacgtcacggagctctatctggatggaaaccagttcactcaggtcccggg
gcagctttccaccttcaagtatctgcagcttgttgacctgagcaacaacaagatcagttc
cctgagcaactcctccttcaccaacatgagccagctcaccaccctgatcctcagctacaa
ctccctgcagtgcatccctccgctggccttcgagggcctccgctccctccggctgctgtc
tctccatggcaatgacatctccagcctccctgagggcatcttcgcagatgtcacctccct
gtcccacctagccatcggggccaaccccctgtactgcagctgcaacctgcgctggctctc
cagctgggtcaagacagggtacaaggagccaggcatcgcccgctgcgctgggccccctga
catggaaggcaagctgctgctcaccacccccgccaagaagtttgagtgccaaggcccacc
ctccctgagtgtccaggccaagtgcaacccctgcctctccagcccctgccagaaccaggg
cacctgcaacaacgacccccttggcttctaccgctgcgcctgccccagcggctacaaggg
cagggactgcgaggtggcactcagcggctgctcctccaccccctgtgccaatggggggcc
ctgccagcctcaggagggggaaggagccgggttcaggtgcctgtgcccggcgggcttcga
gggcctgagctgccgcacggccagcgacccctgcaaggaccacggctgcaagaacggggg
ctcctgcgttcctggtgccaccaactacacctgcctgtgccctgccctctacgcagggga
tttctgtgagcagccaccagatttctgctcggccgagctcagcccatgccagcatggctc
cacctgcgtctccaccagtcagggtcccaggtgcgagtgtgcgcccggctacgtggggag
caactgcagcgaggactttgacgactgccaggaccaccggtgccagaacaacgcccgctg
cctggatgaggtgaacgggtactcctgcctctgcacggagggctacaggtgcctgtgccc
ggcgggcttcgagggcctgagctgccgcacggccagcgacccctgcaaggaccacggctg
caagaacgggggctcctgcctgctgagtgtcaattttgtggaccgcgacacgtacctgca
gttcaccgacctgcaggactggccccgggccaacatcaccctgcaggtctcaacggctga
aggcaatggcatcctgctgtacaacggcgacagcgaccacatggcagtggagctgtacca
gggtcacgtcagggtcagctatgaccccggcacccaccccagctcggccatctacagtgc
cgagaccatcaatgacgggcagttccacaccgtggagctggtgaccttcgatcagatggt
gaacctctccatcgatggtggcagtcccatgaccatggacaactcgggcaagcattacac
gctgaacagcgaggcccccctctacgtgggagggatgcccgtggacgtcaattcggctgc
cttccgcctcntggcagccaacggcacccgctcccccgggtccacccgcaacctctacat
caacaacgagctgcaggacttcaccaagacgcggatgacgccgggggtggtgccgggctg
cgagccctgctaa
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integrated database retrieval system
