Egretta garzetta (little egret): 104134710
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Entry
104134710 CDS
T05152
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03440
Homologous recombination
egz03460
Fanconi anemia pathway
egz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104134710 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104134710 (BRCA1)
03460 Fanconi anemia pathway
104134710 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egz01009
]
104134710 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egz04121
]
104134710 (BRCA1)
03036 Chromosome and associated proteins [BR:
egz03036
]
104134710 (BRCA1)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104134710 (BRCA1)
Enzymes [BR:
egz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104134710 (BRCA1)
Protein phosphatases and associated proteins [BR:
egz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104134710 (BRCA1)
Ubiquitin system [BR:
egz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104134710 (BRCA1)
Multi subunit type E3
BRCC complex
104134710 (BRCA1)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104134710 (BRCA1)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104134710 (BRCA1)
BRCA1-A complex
104134710 (BRCA1)
BRCA1-B complex
104134710 (BRCA1)
BRCA1-C complex
104134710 (BRCA1)
BRCA complex
104134710 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104134710 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
BRCT_2
RING_XB3-XBAT31
zf-RING_2
BRCT_3
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-Nse
zf-RING_10
UvrB
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
104134710
NCBI-ProteinID:
XP_035759461
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MDLSMVAIGDVQNVLSAMQKTLECPICLDVVEEPVSTKCDHTFCRFCMFKLFSKRRKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDAGVKFLNSHHFPKTSTEATAAES
LCKESSVIQSEGFRNRKKRVKESGQENCTLQEANAAAQLTDTRVKRCSLRNKIQKSDSEK
GIYIEFGSDSSEELFKQASNTGLGDKEVLHILSQEKLEEFKSAEKGNEYSCNTQPEKLDA
KEIILPNVVGESDFSKEGLSKKSTRSITEYAKPGQVNMTEDQSSPLNVLAVDLLTEQCDR
IGNASPLRNGDANTEEMDAEQTQCNSKSKEFDLKDSSESRLDKSKELDIVVQSVEAVEMY
EPENDSFHEKELPLEKPLQPETLHCATLNQVSRKRLKRSIQKVNEWFSKSNEILSSNSSQ
DDSAGGTDVSGEEDICLSDKDSCISEKTDPMVDSMEIAVVEGNKRRSKQTADSIKDKIFG
KTYKREKKSNPPIILSEILPTTKKEDVATDEKCLNTSSKDGLKRKRKTARFLQPEDFIKK
KDTEEADGCLQTVGSCLRDAEKKTCDEISAVNESDLSGNKEDDTLAELEEGGGSMWKKAT
EKVTGKHCDGELELSNCDQKSTKKSSAAKRCRHSTRTMCALQLVVDRNSVSPDPSEPQIE
SYPSSEEPRKVDSEQRQVRRSRRLQLLSEEMIKETGKGVVIKRARKYDSDHEGSFSGDQR
NVLVHASECQDLCEPQGMFSSKPLTNLKGGDLEANEMQISLKNSSDAAETGKNLFNPTSS
RQHSNCSSFAPDTSSQEGEIQGSPMLLQPPSMSVVQTASHTTEEMAESCTAFPQDSGHDV
QNVPGDCGPEELPVAKNISELTSEAEDSEVDTQYLRNIFRHSKRLSFSLYRTPMKACAVE
GAASETSKVACADQVENTHSKHLNPESLQEEKTAAESLNRVCEKEKLKTHEPACVRPVTC
FAGTTERMHTGEHQDVSQAANQGTLTPIRMGTARTEGKNRLQKGGQGNEKTVSADIGIES
EVRQNPIKNNRSRSDRSNTEEHVFKRTDLNAVSEIHFSSESNKAEKAKVVYGKGPILDTQ
SRSMICPATCPQRPAEFSCEVTGKKSGKRERKQVKGNEEQATQTANRGMAECLVTEAPDK
PLKGNSDFTGSSETPDGLLSSDDDIEENTSFSETDRKETSAVFAKRSDSALVKELKNKNV
HSKPRSQSIQRSRRRAQKLQSSDEESSEDEDLPCFQALIFGKSVSTPLQINKQETSVVES
SQSPITLPHDGSHDDNNVQKMPEAALSNGCVSPSQESECSVNLFSSQSNMSEESLDGAQE
LKKHLIQVQTSKQVSNVNESKEALQSCNGGLKRSKTDCKEEGQEETNMGANLGEASGSDS
ETSNVEDSCEPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDCEFLPTHRE
LPHSSSEGTLGMEQMRQERGVEFISEGNFENPKCSSSKGFSANEFHVMPSDSLNTKIKKL
EKERSPELLLPSSKPCLLKRTDLEKDLQCDSVLKSKVPSEKTKPVQEAVQEYSQCQLEAG
NTGEQKSGTRLNSASVLSNLSGNVTRSPNSSSSSVRLLSLRTAEATTSSAAARNANKSCA
QECKSKRSVGFPLSVLHNAAGKENATRPVVANRKEMSIVASGLNQSEHLVVQKFARKTRS
TLSNFITEGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEENF
EVKGDVINGRNHQGPKKARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVKQ
LHLFTHKTNSTAVVVVQPDAWMGNMDYRAIQQKNNVAMVTREWVLDSVACYECQEFDAYL
VS
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcaatggttgctattggagatgtgcaaaatgtgctttcagctatgcagaag
accttggagtgcccaatatgcttggatgtggtagaagagccagtttcaacaaaatgtgat
cacacattctgcaggttctgcatgttcaaactcttcagtaaaaggagaaaaggtgtgata
cagtgtcctctgtgcaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaacgatccatgcgtttgagctcgatgctggagta
aagtttttaaacagtcatcactttcctaaaacatccacagaagccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccaaagcgagggcttcagaaacaggaaaaaacgtgtt
aaagaaagtggacaagaaaactgcaccttgcaggaagctaatgcggcagcacaacttaca
gataccagagtcaaaagatgttccctaagaaacaaaatccagaaatctgactctgaaaaa
gggatttatatagagtttggctctgattcatctgaagagctttttaaacaggcaagcaat
actgggttaggagacaaagaagtgcttcacattctatctcaagaaaagctagaagaattt
aagagtgctgagaaggggaatgaatattcttgcaatacacagcctgagaagctggatgct
aaagaaataattctaccaaatgtcgtaggtgaaagtgatttctcaaaggaaggcttgagc
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgaatatgactgaa
gaccagagttctcctttaaatgttcttgctgtagacctactcacagagcagtgtgacaga
ataggtaatgccagtcccttaaggaatggggatgcaaacacagaagaaatggacgcagag
caaactcagtgcaatagtaaaagcaaagagtttgacttaaaagatagttcagagagcagg
ttggataaaagcaaggaactagatattgttgtacaaagcgtggaagctgtggaaatgtat
gaacctgagaatgattctttccatgaaaaagaacttcctctggagaaacctcttcagcca
gagacacttcactgtgctaccctgaatcaagtctctaggaagagactgaagcgaagcatt
cagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttccaattcttcccag
gatgattctgctggagggactgatgtttcaggtgaagaagatatatgtttatcagataaa
gattcctgtatttcagaaaagactgaccctatggtagattccatggaaattgcagtggtt
gaaggaaacaagagaaggtcaaaacaaacagcagatagtatcaaagacaaaatattcggg
aaaacatacaagagagagaagaaatcaaatccccctattattttgagtgagattttacct
actacaaaaaaggaagatgtggctactgatgaaaagtgcttgaatacttccagcaaagat
ggactaaaacgaaaaaggaagactgcccgttttctgcaaccagaggatttcattaagaaa
aaagatacagaagaggcagatgggtgccttcaaactgttggctcatgccttagagatgct
gaaaagaagacatgtgatgaaatttctgctgttaatgagagtgacctctctgggaataag
gaggacgatacactagcagaacttgaggaaggaggaggatccatgtggaaaaaagctact
gaaaaggtgactggcaagcactgtgatggggagctagaactgagtaactgtgatcagaaa
agcactaaaaaaagttctgcagcaaaaagatgcaggcattctactagaaccatgtgtgct
ctacagttagtagtggatagaaactctgtttctcctgatccatctgagccacagattgag
agctatccaagcagtgaagaaccaaggaaagttgattctgaacaaagacaagtcaggcgc
agcaggaggcttcagttactttctgaagaaatgataaaagaaacagggaaaggagtagta
attaagagagcaagaaagtatgacagcgatcatgaagggtctttctctggagaccaaagg
aatgtgttagttcacgcttctgaatgccaagacctgtgcgagccccagggtatgttcagt
tccaagccactcactaatctgaagggtggtgatctggaagcaaatgaaatgcagattagt
ctaaagaattcatctgacgctgcagaaactggaaaaaatcttttcaatcctacatcttca
cgtcagcattcaaattgtagttcctttgcacctgatacaagttctcaagaaggtgaaata
caaggtagccctatgctcctacagcctccttcaatgagtgttgtgcaaactgcttcccac
acgactgaagagatggctgaatcatgtactgcttttccccaggatagtggacatgatgta
caaaatgttccaggggactgtggacctgaagagttgccagtggctaaaaacatttcagaa
ttgaccagtgaagctgaagatagtgaggtagacacgcagtatctgcgaaatatatttagg
cattcaaaacgcttgtcatttagcctttatcgtactcccatgaaggcatgtgcagtagaa
ggtgctgcttctgaaacttcaaaggtggcatgtgctgatcaggtagaaaatacgcatagc
aaacatttaaacccagaaagcttgcaagaagagaaaacagctgctgaaagcttgaatagg
gtttgtgagaaagagaagcttaagacccatgaacctgcttgtgttcgtcctgtgacttgc
tttgccggcaccactgaacgtatgcacacaggggaacatcaagatgtctcacaggctgca
aatcaagggactctgacaccaataagaatgggtactgctaggactgaaggcaaaaacaga
ttgcaaaaaggaggacagggaaatgaaaagacagtgtcagctgacatagggatagaaagc
gaggtgagacagaatccaatcaaaaataatagaagccgaagtgatcggagtaatacagaa
gagcacgttttcaaaagaacagatttaaacgcagtgagtgaaatacacttcagttcagaa
agcaataaagcagaaaaagccaaagttgtttatggcaaaggaccaatactagatactcag
tccagatcaatgatttgtcctgcaacttgtccacaaaggcctgctgaattcagctgtgag
gtcactggaaaaaaaagtggcaaaagagaaagaaaacaagtaaaagggaacgaagagcaa
gcaacccaaacagctaacagagggatggctgagtgtttagttacagaggctccagacaaa
cctcttaaagggaatagtgattttacaggttcttctgaaacccctgatggcttactgtcc
tctgatgatgatatcgaagagaacaccagcttttctgaaactgataggaaagagacatct
gctgtgtttgcaaaaagaagtgacagtgccctggtaaaagaactaaagaataaaaatgtt
cattctaagccaagatctcaaagtattcaaagatctcgaagaagagcacagaaactgcaa
tcttcagatgaagaatctagtgaggatgaagatttaccatgttttcaggcattaatattt
ggcaaatcggtaagcacgccgttgcagatcaataaacaagagacgtctgtggtagagtct
tcacaaagccccatcacattgcctcacgatggaagccatgatgacaataatgtgcagaaa
atgcctgaagctgccctaagtaatgggtgtgtttcaccaagccaggagtcagaatgctct
gtcaacttattttcttcccagtccaacatgtctgaagaatcgcttgatggagcacaagag
ctgaagaaacatttaatacaagttcagacatccaaacaagtgagcaatgtgaatgagagt
aaagaagctcttcagagttgtaatggagggctgaagagaagcaaaactgactgcaaagag
gaaggccaagaagagacaaacatgggagcaaacctaggtgaagcatctggatctgacagt
gaaacaagtaatgtagaagattcatgtgaaccattctctcagggtgaaatccttactacg
cagcagaagaatgctatgcaaaataacctaaaaaaacttcagcaagaaatggctgttctt
gaagcagtgctgaagcagcatggaagccaggactgtgaatttttacctacccatagggaa
ctgccccattccagtagtgaaggaacacttggaatggaacaaatgagacaggaaagaggg
gtagagttcatctcggaaggaaattttgaaaatcctaagtgcagcagttcaaagggattt
tcagccaatgaattccatgttatgccaagtgattctctcaacactaaaatcaaaaagtta
gaaaaagaaaggtctccagaattattgcttccatcttctaaaccctgtttgttaaagaga
acggatttggagaaagaccttcagtgtgacagtgttctgaagagcaaagttccttctgaa
aagacaaaacctgtgcaggaagcagtacaagaatatagtcagtgtcagcttgaagcagga
aacacaggtgagcagaaatctgggaccaggctaaacagtgcatctgtcttatcaaatctc
tctggaaatgtgaccaggagtccaaatagctcttcctcctctgtaaggcttcttagcctt
cgaactgcagaagcaacaactagttctgctgcggctcggaatgctaataaaagctgtgct
caagaatgtaaatcgaagagaagtgtgggttttcctctttctgttctgcacaatgcagct
gggaaagaaaatgctacaaggccagttgtggctaacagaaaagaaatgtcaattgtggca
tcgggtctgaatcaaagtgaacatttggtggtccagaaatttgcaagaaaaactcggagc
actttatctaattttattactgaagggacaacccatgtcataatgaaaacagataaggag
ctggtgtgtgaacggacactgaagtacttcctgggtattgcaggaagaaaatgggtagtt
agttatcagtgggtaattcagtcttttaaagaaggaaggatactggatgaggagaacttt
gaagttaaaggagatgtaatcaatgggagaaaccaccaaggtccgaagaaggctaggcag
tctctgactgaaaagatctttaaagactttgagatctgttgctatggacctttcactgat
atgactacagaacatctagaatggatggtggagctttgtggtgcctctgtagtgaagcaa
cttcatctgttcacacacaaaacaaattctactgctgtcgtggttgtgcagccagacgca
tggatgggaaacatggattatagagcaatccagcaaaagaacaatgttgccatggtgact
cgagagtgggtattagacagcgtggcttgctacgagtgccaggagttcgatgcttacctt
gtgtcctaa
DBGET
integrated database retrieval system
