Candidatus Erwinia haradaeae: ERCIPSTX3056_396
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Entry
ERCIPSTX3056_396 CDS
T05981
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERCIPSTX3056_396 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehd03400
]
ERCIPSTX3056_396 (nth)
Enzymes [BR:
ehd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ERCIPSTX3056_396 (nth)
DNA repair and recombination proteins [BR:
ehd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ERCIPSTX3056_396 (nth)
Prokaryotic type
ERCIPSTX3056_396 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
RrnaAD
HHH_8
Motif
Other DBs
NCBI-ProteinID:
VFP87033
UniProt:
A0A451DK15
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All DBs
Position
1:624175..624846
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AA seq
223 aa
AA seq
DB search
MNNAKRKKILMRLKQNTLKPVTELNYSSHFELLIATVLSAQTTDISVNKITEKLYPVANT
ASAILELDTDGLQQYIKTIGLWKTKARNIINLCRILVKCYDGSIPNNREALEALPGVGRK
TANVVLNIAFHLPTIAVDRHVFRVCNRTNFSIGRNVQEVEQNLLKFVPKKFQIHCHHWFI
FHGRYTCLARKPKCFICNIKDLCEFEGKIDISIPHERLDSGSN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgaataatgcaaaacgtaaaaaaattctaatgcgactgaagcaaaatacactaaaacct
gtaacggaattaaattattcttctcatttcgaactactcattgctacggtgctttctgca
caaactactgacattagcgttaacaaaattactgagaagttatatccggttgcaaatact
gcttcagcaattttagaacttgatacagatggattacagcagtacatcaaaaccatcggc
ctgtggaagactaaggctaggaatattatcaatctctgtcgtatcttggtgaaatgttat
gatggaagcataccgaataacagggaggcgctcgaagctttacctggcgttggtcgaaaa
actgctaatgtagttctaaatatcgcctttcatctgccaacgattgctgttgacaggcat
gtttttcgtgtctgcaatcgaactaatttttcgataggtcgaaatgttcaggaagtagaa
cagaatctgttaaaatttgtacccaaaaaatttcaaatacattgccatcattggtttatt
tttcatggtcgttatacatgcttagcgcgtaaaccaaaatgttttatatgtaacatcaaa
gatttatgtgagtttgaaggaaaaattgatatctcaattccacacgaaagattagattct
ggatctaactag
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