KEGG   Anaerobutyricum hallii: EHLA_2439
Entry
EHLA_2439         CDS       T05310                                 
Name
(GenBank) DNA ligase (NAD+)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ehl  Anaerobutyricum hallii
Pathway
ehl03030  DNA replication
ehl03410  Base excision repair
ehl03420  Nucleotide excision repair
ehl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHLA_2439
   03410 Base excision repair
    EHLA_2439
   03420 Nucleotide excision repair
    EHLA_2439
   03430 Mismatch repair
    EHLA_2439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehl03032]
    EHLA_2439
   03400 DNA repair and recombination proteins [BR:ehl03400]
    EHLA_2439
Enzymes [BR:ehl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     EHLA_2439
DNA replication proteins [BR:ehl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EHLA_2439
DNA repair and recombination proteins [BR:ehl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     EHLA_2439
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EHLA_2439
   MMR (mismatch excision repair)
    DNA ligase
     EHLA_2439
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EHLA_2439
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 PTCB-BRCT DNA_ligase_ZBD BRCT_2 HHH UPF0758_N Lar_restr_allev Nlig-Ia GST_C_7 DUF8054_C
Other DBs
NCBI-ProteinID: SOB72993
UniProt: A0A285PTM4
LinkDB
Position
I:complement(2502720..2504726)
AA seq 668 aa
MKNLLEENRKGFIMDKQARMKELVEVLNKASRAYYQEDREVFSNKEYDELYDELQALEKE
TGIVMSQSPTQNVGYEVLSELEKETHESPMLSLDKTKSPEALRDWLGEREGLLSWKMDGL
TVVLTYRDGILQKAVTRGNGVVGEVITNNARVFKNLPARIPFAGEVVLRGEAVIKYSDFR
KINEGIEDVDARYKNPRNLCSGSVRQLNNEVTARRNVFFFAFALVKAEGRELENSVESNM
LWVQDLGFEIVPYKRVTRENIIGEVQQFSEKIVENDFPSDGLVLIYDDIAYGNSLGRTAK
FPRNAIAFKWADEEAETKLLHIEWSPSRTGLINPIAVFEPVELEGTTVSRASLHNISIME
GLELGENDHIKVYKANMIIPQIAENLTRSGTCSPIAHCPACGGATEVRIENDVKTLYCVN
PYCSAKKVKLFSHYVSRDAMDIEGLSEATLMKMIEQGFLSELNDLYTLEQYKEQIIAMDG
FGEKSYNNLIQSIEKSRETQLFRFVYGIGILNVGSSNAKLLCRHFGNSLENLRGASVEEM
TQIDGIGEVIAASVRDYFDNIHNQKLLEKLLPYLHFEVENISAEGESAQSLLDKTFVITG
TVEHFTNRKELKEKIESLGGKVTGSVSKKTDYLINNDTMSSSSKNKKAKELGIPVITEEE
FLSMIDNN
NT seq 2007 nt   +upstreamnt  +downstreamnt
ttgaaaaacttgctggaagaaaaccggaaggggtttatcatggataagcaggcaagaatg
aaagaacttgtagaagtattgaataaggcttctagagcatactatcaggaagaccgggaa
gtattttccaataaagaatacgatgaattatatgatgaactgcaggcgttagagaaagag
actggtattgttatgagccagtctccgacacagaatgtcggctatgaagtacttagtgaa
ctcgaaaaagaaacacatgaaagtccgatgctgtctttagataagacaaagagcccggaa
gcattacgagactggttaggtgaaagggaagggcttctttcctggaaaatggatggtctt
acggttgtgcttacgtatcgtgacggtattttgcagaaggcagtaacgcgggggaatggt
gttgtaggtgaggttatcacgaataatgccagagtatttaaaaatcttccggcaaggatt
ccgtttgcaggtgaggtcgttcttcgtggtgaggcagtgatcaagtattcggatttccga
aagatcaatgaaggaattgaagatgttgatgcgcgttacaagaatccacgtaatctgtgc
agtggttctgtaagacagctgaataatgaagtgacagccagaagaaatgtatttttcttt
gcatttgcgcttgtaaaagcagaaggaagagagctggagaattctgttgaaagcaatatg
ctctgggtacaggatctcggctttgaaattgtaccgtataagagagtgacaagagaaaat
attatcggagaagttcagcagttttcagaaaaaatcgtagaaaatgatttcccttcggat
ggactggttcttatttatgatgatattgcctacgggaattctcttggaagaacggcaaag
tttcctcgtaatgctattgcgtttaaatgggcagatgaggaggcagagacaaagctttta
cacattgagtggagtccgtcaagaacagggctgattaacccgattgcggtttttgagccg
gtggaacttgagggaacgacagtcagtcgtgcgagccttcataatatcagcattatggaa
ggactggagcttggagagaatgatcatatcaaagtttataaggccaatatgattatccct
cagattgctgagaatctgacgagaagtggaacatgcagtccgattgcccattgtcctgcc
tgtggtggtgcgacagaagtgcggattgagaatgatgtgaagacgttatactgtgtgaat
ccgtattgtagcgcaaagaaagtaaagctcttttctcattatgtgagtcgtgatgcgatg
gatattgaaggattgtcagaagcaacattgatgaagatgatcgagcagggatttttgtct
gaattgaatgacctgtacactttagaacaatataaagagcagattattgctatggacgga
tttggtgagaagtcgtataataatttaatacagtctattgaaaagtcaagagagacacag
ttattccgttttgtttacggaatcggaattcttaacgttggaagttcaaatgcgaagctt
ttatgccgtcattttggcaattcgttagagaatctccgaggagcatccgtagaagagatg
acacagatcgatggaatcggagaagtgatcgcagcaagtgtaagagattactttgataat
atccataaccagaagctccttgaaaagctgctgccatatttgcattttgaagtggagaat
atatcagcagaaggagaatcggcacagagccttttagataagacatttgttattaccgga
acggtagagcacttcacaaaccgaaaggaattaaaagagaagatcgaaagccttggaggc
aaagtgacaggttctgtttctaaaaagacagattatcttatcaataacgatacgatgtct
tcttcaagtaagaataagaaagcgaaagaacttggaatacctgtgattacagaagaagaa
tttctttcgatgattgataataattga

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