Anaerobutyricum hallii: EHLA_2439
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Entry
EHLA_2439 CDS
T05310
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ehl
Anaerobutyricum hallii
Pathway
ehl03030
DNA replication
ehl03410
Base excision repair
ehl03420
Nucleotide excision repair
ehl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHLA_2439
03410 Base excision repair
EHLA_2439
03420 Nucleotide excision repair
EHLA_2439
03430 Mismatch repair
EHLA_2439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehl03032
]
EHLA_2439
03400 DNA repair and recombination proteins [BR:
ehl03400
]
EHLA_2439
Enzymes [BR:
ehl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EHLA_2439
DNA replication proteins [BR:
ehl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EHLA_2439
DNA repair and recombination proteins [BR:
ehl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EHLA_2439
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHLA_2439
MMR (mismatch excision repair)
DNA ligase
EHLA_2439
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EHLA_2439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
HHH
UPF0758_N
Lar_restr_allev
Nlig-Ia
GST_C_7
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
SOB72993
UniProt:
A0A285PTM4
LinkDB
All DBs
Position
I:complement(2502720..2504726)
Genome browser
AA seq
668 aa
AA seq
DB search
MKNLLEENRKGFIMDKQARMKELVEVLNKASRAYYQEDREVFSNKEYDELYDELQALEKE
TGIVMSQSPTQNVGYEVLSELEKETHESPMLSLDKTKSPEALRDWLGEREGLLSWKMDGL
TVVLTYRDGILQKAVTRGNGVVGEVITNNARVFKNLPARIPFAGEVVLRGEAVIKYSDFR
KINEGIEDVDARYKNPRNLCSGSVRQLNNEVTARRNVFFFAFALVKAEGRELENSVESNM
LWVQDLGFEIVPYKRVTRENIIGEVQQFSEKIVENDFPSDGLVLIYDDIAYGNSLGRTAK
FPRNAIAFKWADEEAETKLLHIEWSPSRTGLINPIAVFEPVELEGTTVSRASLHNISIME
GLELGENDHIKVYKANMIIPQIAENLTRSGTCSPIAHCPACGGATEVRIENDVKTLYCVN
PYCSAKKVKLFSHYVSRDAMDIEGLSEATLMKMIEQGFLSELNDLYTLEQYKEQIIAMDG
FGEKSYNNLIQSIEKSRETQLFRFVYGIGILNVGSSNAKLLCRHFGNSLENLRGASVEEM
TQIDGIGEVIAASVRDYFDNIHNQKLLEKLLPYLHFEVENISAEGESAQSLLDKTFVITG
TVEHFTNRKELKEKIESLGGKVTGSVSKKTDYLINNDTMSSSSKNKKAKELGIPVITEEE
FLSMIDNN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacttgctggaagaaaaccggaaggggtttatcatggataagcaggcaagaatg
aaagaacttgtagaagtattgaataaggcttctagagcatactatcaggaagaccgggaa
gtattttccaataaagaatacgatgaattatatgatgaactgcaggcgttagagaaagag
actggtattgttatgagccagtctccgacacagaatgtcggctatgaagtacttagtgaa
ctcgaaaaagaaacacatgaaagtccgatgctgtctttagataagacaaagagcccggaa
gcattacgagactggttaggtgaaagggaagggcttctttcctggaaaatggatggtctt
acggttgtgcttacgtatcgtgacggtattttgcagaaggcagtaacgcgggggaatggt
gttgtaggtgaggttatcacgaataatgccagagtatttaaaaatcttccggcaaggatt
ccgtttgcaggtgaggtcgttcttcgtggtgaggcagtgatcaagtattcggatttccga
aagatcaatgaaggaattgaagatgttgatgcgcgttacaagaatccacgtaatctgtgc
agtggttctgtaagacagctgaataatgaagtgacagccagaagaaatgtatttttcttt
gcatttgcgcttgtaaaagcagaaggaagagagctggagaattctgttgaaagcaatatg
ctctgggtacaggatctcggctttgaaattgtaccgtataagagagtgacaagagaaaat
attatcggagaagttcagcagttttcagaaaaaatcgtagaaaatgatttcccttcggat
ggactggttcttatttatgatgatattgcctacgggaattctcttggaagaacggcaaag
tttcctcgtaatgctattgcgtttaaatgggcagatgaggaggcagagacaaagctttta
cacattgagtggagtccgtcaagaacagggctgattaacccgattgcggtttttgagccg
gtggaacttgagggaacgacagtcagtcgtgcgagccttcataatatcagcattatggaa
ggactggagcttggagagaatgatcatatcaaagtttataaggccaatatgattatccct
cagattgctgagaatctgacgagaagtggaacatgcagtccgattgcccattgtcctgcc
tgtggtggtgcgacagaagtgcggattgagaatgatgtgaagacgttatactgtgtgaat
ccgtattgtagcgcaaagaaagtaaagctcttttctcattatgtgagtcgtgatgcgatg
gatattgaaggattgtcagaagcaacattgatgaagatgatcgagcagggatttttgtct
gaattgaatgacctgtacactttagaacaatataaagagcagattattgctatggacgga
tttggtgagaagtcgtataataatttaatacagtctattgaaaagtcaagagagacacag
ttattccgttttgtttacggaatcggaattcttaacgttggaagttcaaatgcgaagctt
ttatgccgtcattttggcaattcgttagagaatctccgaggagcatccgtagaagagatg
acacagatcgatggaatcggagaagtgatcgcagcaagtgtaagagattactttgataat
atccataaccagaagctccttgaaaagctgctgccatatttgcattttgaagtggagaat
atatcagcagaaggagaatcggcacagagccttttagataagacatttgttattaccgga
acggtagagcacttcacaaaccgaaaggaattaaaagagaagatcgaaagccttggaggc
aaagtgacaggttctgtttctaaaaagacagattatcttatcaataacgatacgatgtct
tcttcaagtaagaataagaaagcgaaagaacttggaatacctgtgattacagaagaagaa
tttctttcgatgattgataataattga
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