Eurypyga helias (sunbittern): 104513407
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Entry
104513407 CDS
T08356
Symbol
BRCA1
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03440
Homologous recombination
ehs03460
Fanconi anemia pathway
ehs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104513407 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104513407 (BRCA1)
03460 Fanconi anemia pathway
104513407 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ehs01009
]
104513407 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ehs04121
]
104513407 (BRCA1)
03036 Chromosome and associated proteins [BR:
ehs03036
]
104513407 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104513407 (BRCA1)
Enzymes [BR:
ehs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104513407 (BRCA1)
Protein phosphatases and associated proteins [BR:
ehs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104513407 (BRCA1)
Ubiquitin system [BR:
ehs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104513407 (BRCA1)
Multi subunit type E3
BRCC complex
104513407 (BRCA1)
Chromosome and associated proteins [BR:
ehs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104513407 (BRCA1)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104513407 (BRCA1)
BRCA1-A complex
104513407 (BRCA1)
BRCA1-B complex
104513407 (BRCA1)
BRCA1-C complex
104513407 (BRCA1)
BRCA complex
104513407 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104513407 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-Nse
zf-RING_6
zf-RING_10
zf-MIZ
Prok-RING_4
zf-ANAPC11
Zf_2nd_IFT121
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104513407
NCBI-ProteinID:
XP_010155043
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MDFSVTAIGDVQNVLFAMQKNLECPICLDVIEEPVATKCDHIFCRFCMFKLLSKKKKGAI
QCPLCKAEVTKRSLKENSRFKQLIEGLLETIRAFELDTGIKLLNSHQFPKPPAEATAAEF
LCKEGSVIQSKGFRNRTKSAKENGQENCTVEADVDMPLRDTRVRRRPLRNNTRKCGPEQG
IYIEFGSDSSEEHFKQASTTGLEDKEALQVSPREKSKELKSAENGDECSCNAQPDKLGAE
ETILPNVVGESGVLKEGLSEKSAWSSTEHAEPGRVHMTEYQSSPLNDLAVDLLTEQCDQI
GDASALRKGDTSFLKNTEEGGAEQTQCSXDLNDSSETRSGKSKETHVVQSVEAVEMCEPE
NDSFREKEVPLEKLLQPESLHCATQDQVSRKRLKRSIQKVNEWLSKSNEILPSNSSQDDS
AGATDVSGEGETCLSDKDSCISEKTDPMVYSMVIAVAEGNERWSKQTADSLKDKIFGKTY
KRERKSNPPVILRETLPTTKKEGVAAATCLSSSSKDRLKRKRKTARVLQPEDFIKTKGAE
EAGGCPPSADCCPGGGEGSAVHESCLSENREDHTLGELEEGGGSIWKKATEKVAGKHCAG
ELDPNNCDETSTKKISAAKKCRRSTRAMCALQLVVDRNYVSPDPAESRIDSYPSSEEPRK
VDSEQRQVRRSRRLQLLAEETTKGTGKGVIKGERNARDQEGSSSGVQRSALVHTSECQGL
SEPQGLWHSKPLPDLKEVDLEANERQMSLKNSSRTAKTGEGLFSPPCQRSGSGAFTPDAA
SPEGEVWASPSPLQSPSVPVVRTVSHPSAEMTASRAAFPQDNADDTHNVPGDFTSEKLPA
ASGPSKEAEDSELDTQHLRNIFRHSKRASFSLYPAPMKACAIEDAASGTPKIRADPVENN
HSKHSKPENFQEEEPPAQSLSGVCEEEKLQGGECGHVSAATGSAGSRGCVRAGQYGEAVS
QVASGGNLAPGRMDTAGPEDKNQPCKGGQGNAKTVSADVGMDSEWRQNPVESSRSQSDRS
KTEGQVFQSTDLNTVDEGHFSSESNEAGKARVVDSKGPTLHLPPGSTICPVEVSGQGVGR
ESERKPVTRNKAQAAQTGPGAPECLAAEALEEPCKGKSDFTGLSETPDGLLCSDGDTEEN
TSFSETDQRERSAVFVKRSDGALVKELHGGNVSPKPRPRRRVQRLPSSDEESSEDDFPCF
QTLLFGDSASTPLQVSKQGTAAVEPSLRSSTLPRDGRHDDSVRQKGPEPALSSGCVSPSQ
ESECSVNLFSSQSNTSEEPADGAQELKKPLIQVPTSPQVSNVSEGKEALWSGNGGLKRSR
PAVRDDCQEDPNTGANLGEVAGYDSETSYVEDSCGPLSQGEILSTQQKNAMQNNLRKLQQ
EMAVLEAVLKQHGSQDCEPLPIHKELPHSSSEGALGMGEMRRAR
NT seq
4273 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgactgcgattggagatgtacaaaatgtgctttttgctatgcagaag
aatttggagtgcccaatatgcctggatgtgatagaagagccggttgcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgcgatc
cagtgcccgctgtgtaaggctgaagttaccaagagaagcctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccgggcatttgagcttgacactggaata
aagcttttaaacagtcaccaatttcctaaaccacccgcagaagccactgctgccgagttc
ctgtgtaaagaaggttctgtcatccaaagtaaaggcttcagaaacaggacaaaaagtgca
aaagaaaatggacaagaaaactgcacggtggaagctgatgtggatatgccacttagagat
accagggtcagaaggcgtcccctaagaaataacactcggaagtgcggccctgagcaaggg
atctatatagagttcggctctgattcatctgaagagcattttaagcaggcaagcactact
gggttagaagacaaagaagcacttcaggtgtcacctcgagaaaagtccaaagagcttaag
agtgctgagaatggggacgaatgttcctgcaacgcacagcctgacaagctgggtgctgaa
gaaacaattctaccaaatgttgtaggtgaaagtggtgtcttgaaggaaggcttgagcgag
aaaagcgcctggagcagcactgaacatgccgaacctggccgagtgcatatgactgagtac
cagagttctcctttaaatgatcttgctgtggacctactcaccgagcagtgtgaccaaata
ggtgatgccagtgccttaaggaagggggacacgtctttccttaagaatacagaagaagga
ggtgccgagcaaactcagtgcagtnnagacttgaacgatagctcagagaccaggtcgggt
aaaagcaaggaaacacatgttgtgcaaagtgtggaagctgtggaaatgtgtgaacctgag
aatgattctttccgtgaaaaagaagttcctctggagaaactacttcagccagagtcgctc
cactgtgctacgcaggatcaagtctctaggaagagactgaagcgaagcattcagaaagtc
aatgagtggctttcaaaaagcaatgagattctgccttctaattcttcccaggatgattct
gctggagcaactgatgtttcaggtgaaggagagacatgcttatcagataaagattcctgt
atctccgaaaagactgaccctatggtatattccatggtaattgcagtggctgaaggaaat
gagagatggtcaaaacaaacagcagatagcctcaaagacaaaatatttgggaaaacgtac
aagagagagaggaagtcaaatccccctgttatcttgagggagactttacctaccacaaag
aaggaaggtgtggctgctgctacgtgtttgagtagttccagcaaagacagactgaaacgc
aaaaggaagactgccagggtcctgcagcctgaggatttcatcaagacaaaaggtgcagaa
gaggcaggtgggtgccctccaagtgctgactgctgccctggaggtggtgaaggctctgct
gttcatgagagttgcctctctgagaatagagaggatcacacactaggagaacttgaggaa
ggaggaggatccatatggaaaaaagctactgaaaaggtggcaggcaagcactgtgctggg
gagctggatccaaacaactgtgatgagacaagcactaaaaaaatttctgcagctaaaaaa
tgtaggcggtctaccagagccatgtgtgctctgcaattggtagtggacagaaactatgtg
tcccctgatccagccgagtcgcgcatcgacagctatccgagcagtgaagagccaaggaaa
gtggattctgagcaaaggcaagtcaggcgcagcaggaggcttcagctacttgcggaagaa
acgacaaaaggaacaggaaaaggtgtaattaagggagaaagaaatgccagggatcaggaa
ggctcttcctctggagttcagaggagtgcgttagttcacacttctgaatgccaaggcctg
agtgagccccagggtttgtggcattccaagccactccctgatctgaaggaggttgatctg
gaagcaaatgagagacagatgagtctaaagaattcatctcggactgcaaaaacgggagaa
ggtctcttcagtcctccgtgtcagcgttcaggcagtggtgccttcacacctgatgcggcg
tctccagaaggtgaagtatgggctagcccttcccccctacagtctccttcagtgcctgtt
gtgcgaaccgtctcccacccgagcgcagagatgacggcatcacgtgctgcttttccccag
gataacgcagatgacacacacaatgttccaggggacttcacatctgaaaagctgccagca
gcttcggggcccagcaaggaggctgaagatagcgagttagacacacagcacctgcgaaac
atatttaggcactcgaaacgcgcatcatttagtctttaccctgctcccatgaaggcgtgt
gccatcgaagatgctgcttctggaacgccaaagatacgtgctgatccggtagaaaataat
cacagcaaacattccaaaccagaaaactttcaagaagaggagccgcctgcccaaagcttg
agtggggtttgtgaggaggagaagctgcagggcggtgaatgtggtcacgttagtgctgcg
actggctctgctggcagcaggggatgtgtgcgcgcagggcagtatggagaagctgtttcc
caggttgcaagtggagggaatctggcaccaggaaggatggatactgcggggcctgaggac
aaaaaccaaccgtgcaaaggagggcagggaaacgcaaagacagtgtcagctgacgtgggg
atggacagcgagtggaggcagaatccagtcgaaagtagcagaagccagagtgatcggagt
aaaacagaggggcaggtttttcaaagcactgatctaaacacagtcgatgaagggcatttc
agctcagaaagcaacgaagcaggaaaggccagagtcgtggacagcaaaggaccaaccctg
catcttccgcctggctcaacgatttgtcctgtggaggtcagcggccaaggtgttggcaga
gaaagcgaaaggaaaccagtgacaaggaacaaagcccaagcagcccaaactggcccaggg
gcgcccgagtgtttagctgcagaggctctagaagaaccttgtaaagggaagagtgatttt
acgggtttgtccgaaacgcctgatggcttgctgtgctctgatggcgataccgaggagaac
accagcttttctgaaactgatcagagggagagatccgctgtgtttgttaaaagaagtgat
ggtgccctggtgaaagagctgcacggtggaaatgtgagccccaagcccagacctcgaaga
agagtgcagagactgccatcttcggatgaggaatctagcgaggatgatttcccgtgtttc
cagacactgttgtttggggactccgcaagcacacctttgcaggtcagcaaacaagggaca
gcagccgtagagccttcactgcgctccagcacgttgcctcgcgatggacgtcatgacgac
agcgttcggcagaaagggcctgagcctgccctaagcagtgggtgtgtttcgccgagccag
gagtcggaatgctctgtcaacttattttcgtcccagtccaacacctctgaagaaccagct
gatggagcacaagagctgaagaagcctttaatccaagttcctacgtccccccaagtgagc
aatgtgagtgagggtaaagaagctctttggagtggtaacggagggctgaagaggagcaga
cccgctgtcagagatgactgccaagaagacccaaacacgggagcaaacctaggtgaagtg
gctggatacgacagcgaaacgagttatgtggaagattcatgcggaccgctctcgcagggg
gaaatcctgtctacacagcagaagaacgccatgcaaaataacctcagaaaacttcagcaa
gaaatggctgtcctggaggcagtgctgaagcagcatggaagtcaggactgtgaacctcta
cctatccacaaggaactgccacattccagtagtgaaggagcacttgggatgggagagatg
agacgagcaagag
DBGET
integrated database retrieval system
