Eurypyga helias (sunbittern): 104517261
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Entry
104517261 CDS
T08356
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04010
MAPK signaling pathway
ehs04020
Calcium signaling pathway
ehs04510
Focal adhesion
ehs04518
Integrin signaling
ehs04519
Cadherin signaling
ehs04540
Gap junction
ehs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104517261 (PDGFRB)
04020 Calcium signaling pathway
104517261 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
104517261 (PDGFRB)
04519 Cadherin signaling
104517261 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104517261 (PDGFRB)
04540 Gap junction
104517261 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104517261 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ehs01001
]
104517261 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ehs04090
]
104517261 (PDGFRB)
Enzymes [BR:
ehs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104517261 (PDGFRB)
Protein kinases [BR:
ehs01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104517261 (PDGFRB)
CD molecules [BR:
ehs04090
]
Proteins
104517261 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
VEGFR1-3_N_Ig-like
Ig_2
Ig_VEGFR-1-like_5th
V-set
VEGFR-1-like_Ig-like
C2-set_2
C1-set
DUF3944
Motif
Other DBs
NCBI-GeneID:
104517261
NCBI-ProteinID:
XP_010160163
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
LLEVTSGGSGLHIEPGDSELVLSLHSTFSLLCYGEGTLVWEREGQPLPASLEHRDGVFVS
NLTLRNVTGRHTGEYACTYSPDQAPEPAERKALYIYIPDPSLVFLPTITSEELFIFITGY
TEAVIPCRVTNPQMQVTLYEKKVENPIPAAYDPQQGFKGFFEDKTYFCRTIVDDQEVDSD
TFYVYRIQVSSVNVSISAVQTIVRQGENVTLMCTVSGNELVNFNWDYPRKQAGKSVEPVT
DFLPGSTHEIRSILIIQNAELEDSGTYTCNVSEGYHEKTDRKDITIQVIERGFVRFHTRL
PSTVYAEVHKSRTIRVEVEAYPQPSIVWLKNNKTLTMESSNEFTITSRNLSETRYQTALV
LVRVKQEEGGFYTIRASNEDDEKELSFHLQINVPAKVVDLKENSSASSGEQTVICSAEGM
PQPEISWSACSDIKRCSTKGQPTRLLGNESAEIGLQTNATYHAELQVYRVNSTLQLHRVD
EPLLLRCTVQNFLGSSSQDITLVPHVLPFKVVIISVILALLVLTVISLIILIVLWQKKPR
YEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGRTLGSGAFGRVVEATAHG
LSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT
EYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTAKEDHVQSHLSLSVESDGGYMDM
SKDDSLDYVPMSNMKGEVKYADIESSNYGTPYELDSYSPSAPERTDRVTLINESPLLSYM
DLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKG
STFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGY
RMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVDCYRKRYQQVDEEFMKSD
HPAIVRTRPTIPGLNNTRLAPSSPTGSILYTAVHQNGGENDYIIPLPDPKPEAICDLPQE
VSISRASSVLNEANTSSTISCDSPLGLRQDEEQESDAQPGCQEPSAGHQEVEESFL
NT seq
3233 nt
NT seq
+upstream
nt +downstream
nt
gtctgctggaggtaacatctgggggcagcgggctgcacatcgaacccggagacagtgagc
ttgtcctcagcctccacagcaccttctccctcttgtgctatggggaaggcacgctggtct
gggaacgggagggtcagccccttcccgcctcactagagcacagggatggtgtctttgtca
gcaatctcaccctcaggaacgtaacgggccgtcacactggcgagtacgcgtgcacctaca
gccctgaccaggctccagagccagcggagaggaaagccctgtacatctacattccagatc
cttccctagtcttcctccctacaatcacctctgaagagctcttcatcttcatcacgggct
acacagaggccgtcatcccctgccgcgtgaccaacccacagatgcaggtcaccctctatg
agaaaaaggtggagaaccccatcccagctgcttatgacccacaacagggcttcaaaggct
tctttgaggacaagacctatttctgccggacaatcgtggatgaccaggaggtggattcag
acaccttctatgtctacaggatccaggtctcctcggtgaacgtctccatcagcgcagtgc
agaccatagtgcgtcagggagaaaacgtcaccctgatgtgcaccgtcagcggcaatgagc
tagtcaacttcaactgggattatccccgcaagcaagcagggaagtctgtggagccagtga
ccgacttcctgcccggatccacccatgagatccgctccatcctcatcatccagaatgcag
agctggaggacagtgggacctacacctgcaacgtctctgagggctaccatgagaaaacgg
accggaaagacatcaccatccaagtgatcgagcgtggctttgtccgcttccacacccgcc
tgcccagcacggtgtatgccgaggtccacaagagccgcaccatccgggtggaggtggagg
cttacccgcagcccagcattgtgtggctgaagaacaacaagacgctgaccatggagagca
gcaacgagttcaccatcaccagcaggaacctgtcagaaacaaggtaccagacggctctgg
tgctggtgcgggtgaagcaggaggaaggaggattttacactatccgggcttccaatgagg
atgatgagaaggagctgtccttccatctgcagataaatgtgccagccaaagtggtggatc
tcaaggagaacagcagtgccagcagtggggagcagacggtaatatgctctgctgaaggca
tgccccagccggagatcagctggtccgcttgcagcgacatcaaaaggtgcagcaccaagg
ggcagcccacccggctgctggggaacgagtcggcagagatcggcctgcagaccaacgcca
cgtaccacgcggagctgcaggtgtaccgcgtgaacagcaccctgcagctgcacagggtgg
atgaacccttgctcctccgatgcacagtgcaaaacttcctgggcagcagctcccaggaca
tcactctggtcccacacgtcttgccattcaaggtggtcatcatctctgtcatcctggcct
tgctggtcctcaccgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctc
gttatgaaatccgctggaaggtgattgagtcagtcagctccgatgggcacgagtacatct
acgtggatcccatgcagctcccttacgactccagctgggaggtgcccagggacaagctgg
tgttaggacgcactctcggatccggtgcctttggacgcgtcgtggaggcaacagcccatg
gcctcagccattctcagtccaccatgaaagtggcggtcaaaatgctcaaatccaccgccc
ggagcagcgagaagcaagccctcatgtccgagctgaagatcatgagccacctgggacctc
acctcaacatcgtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatca
ccgagtactgccgctacggggacctggtagactacctgcaccgcaacaagcacaccttcc
tgcagtcctacggcgagaaggcccggcgagaggcagagctgtatgggaacactgccaagg
aggaccatgtgcagagtcacctctccttgtctgttgagagcgacgggggctacatggaca
tgagcaaggatgattccctggattatgtgcccatgtccaacatgaagggtgaagtcaagt
acgctgacatcgagtcctctaactatggcaccccatacgagctggacagctattccccat
cagctcctgaaagaacagaccgggtgacactgataaatgagtctccactcctcagctaca
tggacttggtgggcttcagcttccaggtggctaatgggatggagttcctggcttccaaaa
actgtgtgcatcgtgacctggctgccaggaacgtcctcatctgtgaggggaagctggtga
agatctgtgactttggcctggcaagagacatcatgagggattccaactatatctccaaag
gcagtaccttcttgccccttaagtggatggctccagagagcatcttcaacaacctttaca
ccaccctgagtgatgtgtggtcctttgggattctcctctgggagatattcactttagggg
ggactccataccccgaactgcctatgaacgaacagttctacaatgccatcaaacgtggct
atcggatgtccaaacccacccacgcctctgatgagatctacgacatcatgcagaagtgtt
gggaagagaagtttgagatcagaccgtccttctcgcagctggtggtgctaatgggaaacc
tcttggtcgattgctacagaaagaggtaccaacaggtggatgaagagttcatgaagagtg
accaccccgctattgtccgcacaagacccacaatccccggactgaacaacaccaggctcg
ctcccagctcgcccaccggcagcatcctctacacagccgtgcaccagaacgggggcgaaa
atgattatatcatccctctgcccgaccccaaacctgaggcgatctgtgatctgcctcagg
aggtctccatcagccgggccagctctgtgctgaacgaggccaacacatcatcgacgatat
cctgtgacagccccctgggcctccggcaggacgaggagcaggaatccgatgcacagccag
gctgccaggagccatccgcagggcaccaagaggtggaggagagtttcctgtag
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