KEGG   Emiliania huxleyi: EMIHUDRAFT_216987
Entry
EMIHUDRAFT_216987 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
ehx  Emiliania huxleyi
Pathway
ehx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EMIHUDRAFT_216987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_216987
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     EMIHUDRAFT_216987
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 NACHT AAA_28 DUF3584 RsgA_GTPase MMR_HSR1 AAA_22 Zeta_toxin AAA_23 AAA_15 Roc AAA_16
Other DBs
NCBI-GeneID: 17255152
NCBI-ProteinID: XP_005761546
JGI: Emihu1_216987
UniProt: A0A0D3ICY2 R1BI86
LinkDB
Position
Unknown
AA seq 318 aa
MAAFSLSDVRFAYATTSPAVLSNVTLEVAPRSRVVLVGANGAGKSTLLRLVAGRRRASGG
SARTLGGDAFECTTNALRVNLVTADWESDLTLPVSRLVAGAVRASGASVPRVSRLIEALG
VEELLEKELHSLSDGQQRRVQLFCKLLPERDLATNSLDVLSRAALLSFLREESEGRGATV
VFATHIFDGLDGWATDLVHLDGGMLLRHLPAASLARASLHATERRRAGDAAGRRTTDDLA
RSLVAAATAAVSEAHAAAEWSAALKRSRPAPAEDAAASTKAASAMQPKAPPMPAAAQRIA
PVLQGALGALSAAGTTDV
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggccttctctctctccgacgtccgcttcgcgtacgcgaccacctctcccgccgtg
ctgtccaacgtcacgctcgaggtcgcgccgcgctcgcgcgtcgtgctcgtgggagccaac
ggcgccggcaagtcgacgctgctgcgtctagtcgcgggccgtcgccgtgcgagcggcggt
tccgcgcgcacgctgggcggcgacgcctttgagtgcaccaccaacgcgctccgcgtcaac
ctcgtcaccgccgactgggagtcggacctcacgctgcccgtctcccggctcgtcgctggc
gccgtgagggcgagcggcgcctcggtgccgcgcgtctcgcgtctgatcgaggcgctcgga
gtggaggagctgctggagaaggagctccactccctctcggacgggcagcagcgccgcgtg
cagctcttctgcaagctgctgcccgagcgtgatctcgcgaccaactcgctcgacgtcctc
tcccgcgccgcgctgctctccttcctgcgcgaggagagcgagggtcgaggcgcgacggtc
gtcttcgcgacgcacatctttgacggcttggacggctgggccacggatctcgtccatctc
gacggcggcatgctgcttcgccacttgccagccgcctctctcgcccgcgcctcgctgcac
gccacggagcggcgccgtgcgggtgacgccgcgggaaggcgcaccacagacgacctcgcg
cgcagcctcgtcgcggccgccacggcggccgtcagcgaggcgcacgcggcggcggagtgg
tctgccgcgctgaagcgctctcgccccgcgccggcagaggatgctgcggcgtcgaccaag
gcggcgtctgcgatgcaacccaaggcgcccccgatgcccgccgccgcccagcgtatcgcg
cccgtcctccagggggcgctcggcgcgctgagcgcagcaggcactacagatgtttga

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