KEGG   Emiliania huxleyi: EMIHUDRAFT_358602
Entry
EMIHUDRAFT_358602 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03420  Nucleotide excision repair
ehx04120  Ubiquitin mediated proteolysis
ehx04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EMIHUDRAFT_358602
   04120 Ubiquitin mediated proteolysis
    EMIHUDRAFT_358602
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_358602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ehx04121]
    EMIHUDRAFT_358602
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_358602
Enzymes [BR:ehx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     EMIHUDRAFT_358602
Ubiquitin system [BR:ehx04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   EMIHUDRAFT_358602
  Multi subunit type E3
   SCF complex
    Ring finger protein
     EMIHUDRAFT_358602
   Cul2 complex
     EMIHUDRAFT_358602
   Cul3 complex
     EMIHUDRAFT_358602
   Cul4 complex
     EMIHUDRAFT_358602
   Cul7 complex
     EMIHUDRAFT_358602
   Cul8 complex
     EMIHUDRAFT_358602
   Cul9 complex
     EMIHUDRAFT_358602
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      EMIHUDRAFT_358602
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      EMIHUDRAFT_358602
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 Prok-RING_4 zf-RING_11 zf-Nse zinc_ribbon_16 PHD_NSD zf-C3HC4_4 Rtf2 zf-RING_Vps41 zf-C3H2C3
Other DBs
NCBI-GeneID: 17255269
NCBI-ProteinID: XP_005761400
JGI: Emihu1_358602
UniProt: A0A0D3ICI6 R1DDS3
LinkDB
Position
Unknown
AA seq 109 aa
MEVDSKADDKAAGPRFVVKKWNAVTFWSWDICTDTCAICRNKLYEPSIEAQANPGLADDA
GYSIAWGCCGHVFHLDCISRWLKTRSVCPLCNREWEFAKIEKIAMYNTE
NT seq 330 nt   +upstreamnt  +downstreamnt
atggaggtcgatagcaaggctgatgacaaggccgccggcccccgctttgtcgtcaagaaa
tggaacgccgtcaccttctggtcatgggacatctgcaccgacacgtgcgccatctgccgc
aacaagctgtacgagccctcgattgaggctcaagccaaccccggcctggcagacgacgcc
ggctactcgatcgcgtggggctgctgcgggcacgtgttccacctcgactgcatctctcgc
tggctcaagacgcgctccgtctgcccgctctgcaaccgagagtgggagtttgcaaagatc
gagaagatcgcaatgtacaacaccgagtag

DBGET integrated database retrieval system