Emiliania huxleyi: EMIHUDRAFT_432584
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Entry
EMIHUDRAFT_432584 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_432584
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_432584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_432584
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_432584
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EMIHUDRAFT_432584
mRNA degradation factors
5'-3' decay
Lsm complex
EMIHUDRAFT_432584
Spliceosome [BR:
ehx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EMIHUDRAFT_432584
Complex C
U2 snRNP components
EMIHUDRAFT_432584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
17260920
NCBI-ProteinID:
XP_005767144
JGI:
Emihu1_432584
UniProt:
A0A0D3ITY0
R1DJQ4
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MSSVVAEPLDLVRLSLDERILVKLRGDRDLRGRLHAFDQHLNMVLGEVEETVTTIEVDEE
TYEEIIKTSKRQIDMLFVRGDGVVLVSPPLRTS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagtggtcgccgagccgctcgatctggtccgcctctccctcgacgagcgcatc
ctcgtcaaactccgcggcgaccgcgacctgcggggacggctccacgcgttcgaccagcac
ctcaacatggtgctcggcgaggtggaggagacggtgacgacgatcgaggttgacgaggag
acgtacgaggagatcatcaagacctccaagcggcagatcgacatgctgtttgtgcgcggc
gacggcgtggtgctggtgtcccctccgctgagaacctcctga
DBGET
integrated database retrieval system
