Emiliania huxleyi: EMIHUDRAFT_45550
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Entry
EMIHUDRAFT_45550 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ehx
Emiliania huxleyi
Pathway
ehx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMIHUDRAFT_45550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_45550
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EMIHUDRAFT_45550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
SMC_N
RsgA_GTPase
AAA_23
DLIC
AAA_30
AAA_27
AAA_15
AAA_18
AAA_28
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
17281590
NCBI-ProteinID:
XP_005788748
JGI:
Emihu1_45550
UniProt:
A0A0D3KKN4
R1FS59
LinkDB
All DBs
Position
Unknown
AA seq
158 aa
AA seq
DB search
SLQDVSFSLPAGSRTLLLGANGAGKSTLLSVLGGKHMVEEGMARVLGRPAFHDTSLATEL
ALLTGNWTHTVAFVGHNVPYQAMEVSRLIESHSVGVDATRVQRLVSLLEVDSSWNLTTVS
DGQRRRVQILCKLLKPSSVLLLDEITTDLDLLARQVAL
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
tcgctgcaggacgtgagcttctccctgcccgccggctcgcgcaccctcctcctcggcgcc
aacggcgcgggcaagtcgacgctcctctcggtgctcggaggcaagcacatggtcgaggag
ggcatggcgcgcgtgctcggccggcccgccttccacgacacgtccctcgcaacggagctg
gcgctgctgaccggaaactggacgcacacggtcgcctttgtggggcacaacgtcccctac
caggcgatggaggtctcgcgcctcatcgagtcgcactctgtcggcgtcgacgcgacgcga
gtgcagcggctggtctcgctgctcgaggtggactcgagttggaacctgacgacagtctcg
gacgggcagcggcggcgcgtgcagatcctgtgcaagctgctcaagccctcgtccgtcctc
ctcctcgacgagatcaccaccgacctcgacctgctcgcgcggcaggtggcactg
DBGET
integrated database retrieval system