KEGG   Emiliania huxleyi: EMIHUDRAFT_45550
Entry
EMIHUDRAFT_45550  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
ehx  Emiliania huxleyi
Pathway
ehx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EMIHUDRAFT_45550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_45550
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     EMIHUDRAFT_45550
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_25 SMC_N RsgA_GTPase AAA_23 DLIC AAA_30 AAA_27 AAA_15 AAA_18 AAA_28 VapE-like_dom
Other DBs
NCBI-GeneID: 17281590
NCBI-ProteinID: XP_005788748
JGI: Emihu1_45550
UniProt: A0A0D3KKN4 R1FS59
LinkDB
Position
Unknown
AA seq 158 aa
SLQDVSFSLPAGSRTLLLGANGAGKSTLLSVLGGKHMVEEGMARVLGRPAFHDTSLATEL
ALLTGNWTHTVAFVGHNVPYQAMEVSRLIESHSVGVDATRVQRLVSLLEVDSSWNLTTVS
DGQRRRVQILCKLLKPSSVLLLDEITTDLDLLARQVAL
NT seq 474 nt   +upstreamnt  +downstreamnt
tcgctgcaggacgtgagcttctccctgcccgccggctcgcgcaccctcctcctcggcgcc
aacggcgcgggcaagtcgacgctcctctcggtgctcggaggcaagcacatggtcgaggag
ggcatggcgcgcgtgctcggccggcccgccttccacgacacgtccctcgcaacggagctg
gcgctgctgaccggaaactggacgcacacggtcgcctttgtggggcacaacgtcccctac
caggcgatggaggtctcgcgcctcatcgagtcgcactctgtcggcgtcgacgcgacgcga
gtgcagcggctggtctcgctgctcgaggtggactcgagttggaacctgacgacagtctcg
gacgggcagcggcggcgcgtgcagatcctgtgcaagctgctcaagccctcgtccgtcctc
ctcctcgacgagatcaccaccgacctcgacctgctcgcgcggcaggtggcactg

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