Enterococcus innesii: ENLAB_02340
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Entry
ENLAB_02340 CDS
T08116
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eie
Enterococcus innesii
Pathway
eie03030
DNA replication
eie03410
Base excision repair
eie03420
Nucleotide excision repair
eie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ENLAB_02340 (lig)
03410 Base excision repair
ENLAB_02340 (lig)
03420 Nucleotide excision repair
ENLAB_02340 (lig)
03430 Mismatch repair
ENLAB_02340 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eie03032
]
ENLAB_02340 (lig)
03400 DNA repair and recombination proteins [BR:
eie03400
]
ENLAB_02340 (lig)
Enzymes [BR:
eie01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ENLAB_02340 (lig)
DNA replication proteins [BR:
eie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ENLAB_02340 (lig)
DNA repair and recombination proteins [BR:
eie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ENLAB_02340 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ENLAB_02340 (lig)
MMR (mismatch excision repair)
DNA ligase
ENLAB_02340 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ENLAB_02340 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
BDG66670
LinkDB
All DBs
Position
complement(238354..240384)
Genome browser
AA seq
676 aa
AA seq
DB search
MDVPSKEIQSRAEELRTQLNQYAYEYYVKDQPSVEDYLYDQLYAELVEIETNYPQLVTED
SPTQRVGGIILPGFEKVTHDIPLYSLNDVFDKEGIVAFDARVQKALGKAVDYVCELKIDG
LSISLKYEEGRFVRGATRGDGTVGENITENLKTVKSIPLKLKEPISLEVRGECYMPKASF
LKLNQQREEEGVEVFANPRNAAAGSLRQLDTRIAAQRNLSTFLYTLADFGPIEANDQFSA
LNELDQLGFRTNHERRVCHTIDEVWAYIEEFHDKRSELPYEIDGVVIKVNNFKDQDALGF
TVKAPRWAAAYKFPPEEAETVIETIEWTVGRTGVVTPTAVMTPVRVAGTTVSRASLHNVD
FIKMKDIRIGDSVIIYKAGDIIPEVAKVLEEKRTEASQPFESPTHCPECGSELIHLDEEV
ALRCINPKCPAQIKEGLSHFVSRNAMNIDGLGPRVLEQMFDKSLVKDVADLYFLTEEQLL
TLDKIKEKSANNLLRAIHQSKENSVERLIFGLGIRHVGAKAARILAEHFGDLRTLSKAKE
EEIISLETIGATIAESVVTYFDNQEVHDLLDELEKAGVNFAYLGLRTDQLEEVESPFKEK
TIVLTGKLSHFTREEAKERIENLGGKVTGSVSKKTDIVVAGEEAGSKLTKAQSLGVTVWD
EAQMVAAIEGSHSADQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcccttcaaaagaaatccaatcacgagcagaagagctacgtacgcaattaaat
cagtacgcctacgaatactatgttaaagatcaaccttctgttgaagattatctctatgat
cagctgtatgcagaactggttgaaattgaaaccaactacccgcagctagtaaccgaagac
tcgcccacccaacgagtaggtggcatcattttacctggctttgaaaaagtcacccatgat
atcccactttatagtttgaacgatgtgtttgataaagaaggaatcgtggcttttgatgcc
cgtgttcaaaaagcattggggaaagcggtagattatgtctgcgagttaaaaatcgatgga
ttgtctatctcattaaaatatgaagaagggcgctttgttcggggagcaactcgaggggat
ggtacggtaggtgaaaacattacagaaaacctaaagaccgtcaaatcgatcccactaaaa
ttaaaagaaccaatctcgttggaagttcgtggcgaatgctatatgccaaaggcttcgttt
ttgaagttgaatcaacagcgagaagaagaaggggtggaagttttcgccaatccgagaaac
gcagctgctggaagcttgcgacaattagacacacggatcgcagcccaaagaaacttaagc
accttcttgtacacactggctgattttggtccgattgaagccaatgatcaattttcggca
ttgaatgaattagatcaattaggctttcgtacaaatcacgaacgcagagtttgccacacc
atcgatgaggtatgggcatatatcgaagagtttcatgacaagcgcagtgagcttccttac
gagatagatggtgttgtcatcaaagtcaataattttaaagatcaagatgcgctaggcttt
accgtaaaagcaccccgatgggcggcggcatataaatttccaccggaagaagcggaaaca
gtgatcgaaacgatcgaatggaccgtgggacgaacgggtgttgtgacaccgaccgctgtt
atgacccctgtccgggttgccggaactacggtcagccgtgccagtttgcataatgtagat
ttcattaaaatgaaggacattcgcattggcgattcggtcatcatctataaggcgggggac
attattccagaggttgcgaaagtcttggaagaaaagcgcacggaagcaagtcaacccttt
gaatcgcctacacattgtcccgaatgcgggagtgagctgatccatttagatgaagaagtt
gccttgcgttgtatcaatccgaagtgtccagcgcagatcaaagaggggttaagccacttt
gtttcccgaaacgctatgaatattgatggtttagggccacgtgttttagagcaaatgttc
gataaatccttagtcaaagatgtggccgacttgtactttttaacagaagaacaattgctg
accctcgataaaatcaaagagaaatcagctaataaccttttgcgtgccatccatcaaagc
aaagaaaattcagttgagcgcttgattttcgggctaggcatccgtcatgttggtgccaaa
gcggctcggattttagcggaacattttggtgatcttcgaacccttagcaaagccaaagaa
gaagaaatcatttcgttggaaaccattggtgctacaattgccgaaagtgtcgttacgtat
tttgacaatcaagaagttcacgaccttttagatgaacttgaaaaagcgggtgtcaacttt
gcttatctagggctgagaacggatcaattggaagaagtggagtcgccatttaaagagaaa
acaatcgttttgacagggaaattgagtcatttcacccgcgaagaagccaaggaacgaatt
gaaaatctcggtgggaaggtaacaggcagtgtatcgaaaaagaccgatatcgttgttgct
ggggaagaagcaggcagcaaactgaccaaagcacaatccctaggtgtcaccgtttgggat
gaagctcaaatggtggctgcgatcgaaggcagtcattcggcagatcaataa
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integrated database retrieval system
