Erysipelothrix inopinata: H9L01_00850
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Entry
H9L01_00850 CDS
T06822
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eio
Erysipelothrix inopinata
Pathway
eio03030
DNA replication
eio03410
Base excision repair
eio03420
Nucleotide excision repair
eio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L01_00850 (ligA)
03410 Base excision repair
H9L01_00850 (ligA)
03420 Nucleotide excision repair
H9L01_00850 (ligA)
03430 Mismatch repair
H9L01_00850 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eio03032
]
H9L01_00850 (ligA)
03400 DNA repair and recombination proteins [BR:
eio03400
]
H9L01_00850 (ligA)
Enzymes [BR:
eio01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H9L01_00850 (ligA)
DNA replication proteins [BR:
eio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9L01_00850 (ligA)
DNA repair and recombination proteins [BR:
eio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H9L01_00850 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L01_00850 (ligA)
MMR (mismatch excision repair)
DNA ligase
H9L01_00850 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9L01_00850 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
BRCT_2
HHH
Auto_anti-p27
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QNN60951
UniProt:
A0A7G9RZC6
LinkDB
All DBs
Position
complement(168281..170260)
Genome browser
AA seq
659 aa
AA seq
DB search
MSQNRILELRKLLHRYNYEYHVNDAPTIPDTEYDQLLKELNELEALHPEMADPNSPTQKV
GGVVSDKFEKVVHRFPMYSLGNAFSFEDLKEFDSRIRQSYPGAEYVVELKIDGLAMSLDY
EDGQFTQAVTRGDGTVGENVSSNVRVIQSVPLSLNEPVDVTVRGEVFMPNASFTRANELR
KEMGEPLFANCRNAAAGTIRQLDSKVVASRGLDAFWYTLVNAEELEIEGQYEALTYLHNI
GFKTNPEIKKFKTIAEVWERVQEIEALRDQYPYDIDGAVIKVNQFAIQNALGFTVKTPRF
AIAYKFKAEEVKSRVEDIFVTVGRTGKITPNAKLTPVQISGSLVSYATLHNEDYIQRKDI
RIGDDVLVRKAGEIIPEIVSVDVTNRTAAQVPYKFPETCPTCDGPLVRVADEADHYCVNA
DCPAKIVESLIHFASREAMNIDTLGEKRVLQLHEAGLLNTIQDIYTLHLHSNQLQTLEKM
GDKSAEKLLTAIENSKQNTIDKLIFGLGIRHVGSKTSAVLARHFKTLTALMEATQEELLE
IEEIGTVIADSVVSFFNVEDNVKCVQDLIEFGLNDEYVDAQVSQKFEGLKFVLTGTLQEL
TRSEAKKLIEAQGGSVSGSVSSKTDVVVYGESAGSKLAKAQELNIQTWDEAQFIQEVNS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaatcgtatcttagaattacgtaaattactccatcgttacaattatgaatat
catgtcaatgatgcaccaacgattcctgatacagaatatgaccaactcctcaaagaatta
aatgagttagaggcattacatcctgagatggcggatccaaactcaccaactcaaaaagta
ggaggcgttgtctcagataaatttgagaaagtggtacaccgttttccaatgtattcttta
ggaaatgcattctcttttgaagaccttaaggaatttgattcacgaatccgtcaaagttat
cctggggcagaatatgttgttgagcttaagattgacggtctcgccatgtcattggattat
gaagatggtcagtttacgcaagctgtgactcgtggtgatggtacggttggtgaaaatgtc
agcagtaatgtgcgtgtcattcaatcggtacccttatcattaaacgaaccagtggacgtc
acggttcgaggagaagtatttatgccgaatgcatcctttacacgtgctaatgagctgcgt
aaggaaatgggcgaacctttatttgcaaactgtcgtaacgcagcagctggcacaattcgt
caacttgattctaaagtagtagcatctcgaggtttagatgcattttggtacacacttgtg
aatgctgaagaactcgaaattgaaggacagtatgaagcgttaacgtatctccataatatt
gggtttaaaacaaatccagaaattaaaaaatttaaaacaatcgctgaagtatgggaacgt
gttcaagaaattgaggcattgcgtgatcagtacccttacgatattgatggtgcagttatc
aaagttaatcaatttgccattcaaaatgcacttggatttacggtgaaaacaccacgtttc
gcgattgcttataaatttaaagcagaagaagtcaaaagtcgggttgaggatattttcgtg
acggtggggcgtacagggaaaattactcctaatgcgaaacttacacctgttcaaatatct
ggatcccttgtaagttatgcaacactgcataatgaagactatattcaacgtaaagacatt
cgcattggtgatgatgtcttggttcgaaaagcgggggaaatcattcccgaaatcgtttcg
gtggatgttaccaatcgaacggcagcgcaagttccttataaatttccagaaacatgtcca
acatgtgatggaccgctagtcagagttgctgatgaagccgaccactactgtgtcaatgct
gattgtcctgcaaaaattgttgagtctttgattcactttgcatcgcgtgaagcaatgaat
attgatacattgggggagaaacgtgttcttcaacttcacgaagcaggcttattaaatacg
atacaagatatttataccttgcatcttcatagtaatcaattacaaactcttgaaaaaatg
ggagataagtcagctgaaaaattactgacagcgattgaaaacagcaaacaaaataccatt
gataaattgatttttggtttgggaattcgtcatgttggatcaaagacttcggcagtcctt
gcccggcactttaaaactcttacagcacttatggaagcaactcaggaagaactcctagaa
atagaagagataggaactgttatcgcagattcggttgtttctttctttaatgttgaagat
aatgtaaaatgtgtacaggaccttattgaatttgggcttaacgatgaatatgttgatgct
caagtatcacagaaatttgaagggttaaaattcgtactaacaggaacgttacaagaattg
acacgttctgaggcgaaaaaacttatcgaagcacagggaggttctgtcagtggtagtgtg
agttcgaagacagatgttgtcgtctacggagaaagtgcaggttctaaacttgcgaaggca
caagaactgaacattcaaacatgggatgaagcacagttcatccaagaggtaaattcatga
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