Entamoeba invadens: EIN_082580
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Entry
EIN_082580 CDS
T04133
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component, putative
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
eiv
Entamoeba invadens
Pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_082580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eiv03041
]
EIN_082580
Spliceosome [BR:
eiv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EIN_082580
Complex C
U5 SnRNP specific factors
EIN_082580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
MMR_HSR1
TniB
Motif
Other DBs
NCBI-GeneID:
14884126
NCBI-ProteinID:
XP_004184522
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MDNFDEFGNYLGPTIPSHTSPLPDQPNAENPPPPEHNSPDKPNLCLMEEDNSDALPDNQI
VLHEDKEYYHTAEDVYGEDVEVLFRDEDEQSLDTPIIPPKNKKVIKNEFDSIPLSNTNFE
YLKELMKNTSKIRNIAIAGALHHGKTELVDVFYQYTHEKQIDVEKMTQHYLDNRLDEQKM
KISLQTNYITLCLPTTRNGHFVVNIADTPGHCDFIDERVTSLSLMDSLLLVVDVSEGVLQ
TTRDVIKEAILHHKEIVLVLSKIDRLIVELKLPPEDFYCKVREVVIDVNSEIRAYGGVPV
SPEDNSVVFESSVFGIFFTLQSFAVKYIPKKCQPTLEQKLRGAIPFDPKVFAKNLWGDFA
FDHKTHKFTKLTENSKRAFVEFVAEPIYKLTVSCISFEGKQLKEALRRFGVKLEGDENKM
NNMSILRTAFSKFFGELNMTSIGDVLFGLQDSTIGGKRINDIKNSSIKSAVDVCSPDGIV
VASVLRMTPDKTCHENLGIVRVWSGVLKKGKYTILNGQLCNNTLDKMEEDSLQCDINEVS
INMGRYFVPSEIPCGCVCVVHGIENNVEKSGTIYGDGTTETEDICLYKSPIPTMKIVVEP
LNPAQTQLVRKAITRAVQCYTGSQVKCEESGELNIIGYGEMYLDCLLRDIRLMFGEFEMR
VSDPMVVFRESISVQSQMRSISMSGNKKNKIGVIVEPLDEKICDGISSGNIHMCGDLPNI
LRNKFNVDILESKSVMSISNNPNMLENDVLDPNTRSQVYKVSQSCGIGFNWAMKTGPLCE
EEMMNCKVRIIEASLEENADPQQIMQAMRKAIYAGIILANPVLLEPIYSVEILTPEVARS
RIEKSIRERRGFVDSVKAIDGTPFIAMYASLPLMDMFGFEIDVRFFTRGQAFVQSRFERW
GIVPGDPLDKEIKPLNLQPNPQPYLAREFMMKTRRRKGLTDDADIEKYFDGEMLATMNQL
NFIF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacaacttcgatgaatttgggaattatttaggcccaaccatcccaagtcacacatcg
cctttacctgatcaaccaaatgcagaaaacccgccacctcctgaacataactctcccgac
aaacccaatctttgtttaatggaagaagataattccgatgctcttcccgataaccaaata
gttcttcatgaggacaaagagtattatcacaccgctgaagacgtatatggcgaagacgta
gaggtgttgtttagagatgaagacgaacagtcattggacaccccaattataccaccgaag
aataaaaaagtgatcaaaaatgaatttgactccatcccactgagtaacaccaactttgag
tatttgaaggagttgatgaagaacacgtcgaaaatcagaaacattgcaatagcaggcgct
ttacaccatggaaagactgaacttgttgatgtattttatcagtacacgcacgagaaacaa
attgacgtcgagaagatgacgcaacactatttagataacagactcgatgaacagaaaatg
aagatcagccttcaaaccaattacatcacattatgtctgccaactacacgaaatggtcat
tttgtagtgaatattgcagacactcctggtcactgtgatttcattgatgaaagagtgaca
tccttatctttaatggactcgttgctgttagtagtcgatgtgagtgagggggtactccaa
acaacacgagacgttattaaagaagccattttgcaccacaaagaaatagtactggtgttg
agtaaaatagacagacttattgtggagttgaaactcccaccagaagatttttactgtaaa
gtgcgagaggtagtcatcgatgtcaattctgaaatacgtgcatacggtggggtacccgta
tctccagaagacaattccgttgtttttgaatcttctgtgtttggcatcttcttcacactt
cagtcgtttgcagtcaaatacatcccaaaaaagtgccaaccaacattggaacagaaatta
cgaggagctattccattcgacccaaaggtatttgcaaagaacttgtggggcgacttcgca
ttcgaccacaaaacacacaaattcacgaaactcactgaaaattcaaagagagcgtttgtc
gagtttgtcgcagaacccatttacaagctgactgtgtcgtgcatatcattcgaaggaaaa
caactcaaagaggcgttaaggagatttggagtgaaattggaaggggacgaaaacaagatg
aataacatgtcgatacttcgaacagcattttctaagttttttggtgagttgaatatgaca
agcataggagatgttttgtttgggcttcaagactccactattggtgggaaacgtattaat
gatatcaaaaattcgagtattaaaagtgctgtcgatgtgtgttccccagatggaattgtt
gttgcaagtgttttgcgaatgactcccgacaaaacgtgtcacgagaatttgggaatagtc
agagtgtggagtggtgttttgaagaaagggaagtacacaattctcaatggtcaattgtgc
aataatacgttggataagatggaagaagactccctacaatgtgacatcaatgaggtttcg
attaacatggggagatactttgtgcccagcgaaataccgtgtgggtgtgtttgtgttgta
catggcatcgagaacaacgtcgagaagagtgggacaatatatggtgatggtacaactgaa
acagaagatatttgtctctataagtcgccaattccaacaatgaaaattgttgttgaacca
ctgaacccagctcaaacgcaattggtgcggaaagctattacacgagcagtccagtgctac
acggggagtcaggtcaaatgcgaagaaagtggcgagttgaatatcattggatacggtgag
atgtatttggactgcctactacgtgacattcgattgatgtttggggagtttgaaatgcga
gtgagtgacccaatggtagtatttagagagtctattagtgttcagtcgcagatgagaagc
atctcgatgtctggaaacaagaaaaacaaaattggagtcattgttgaaccgcttgacgaa
aagatatgtgacgggatatcatctggtaacattcacatgtgtggcgatcttcctaatatc
cttcgaaacaagttcaacgttgatattttagagagcaagtcagtcatgagtatctctaat
aatccaaatatgctcgaaaacgatgttttagacccaaatactcgaagtcaagtgtacaag
gtatcgcagtcatgtggtattggatttaattgggcaatgaaaacggggccattgtgtgaa
gaggagatgatgaattgtaaagtgagaatcattgaggcaagcttggaagagaatgcagac
ccacagcaaatcatgcaagcgatgagaaaggctatatacgccggaataatattggcaaac
ccagtcttactcgagccgatttactctgttgaaatcttgacgccagaagttgctcgaagt
cgaattgaaaagagtatacgagagagaagggggtttgtggatagtgtcaaggcaatagat
ggcaccccgtttatcgcgatgtatgcgtcgttacctttgatggacatgtttgggtttgaa
attgatgttcgtttcttcacgcgaggacaggcatttgttcagtctcgatttgagcgatgg
ggtattgtccctggtgatcctcttgataaagaaatcaagcctctcaacttacaaccaaac
ccacagccttatcttgcacgagaatttatgatgaaaacacgaagaagaaaaggtcttact
gatgatgctgacattgaaaaatactttgacggcgaaatgttagcaacgatgaatcaactt
aatttcatcttttga
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