Embiotoca jacksoni (black perch): 138191477
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Entry
138191477 CDS
T10523
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138191477 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138191477 (kdm2ba)
04121 Ubiquitin system [BR:
eja04121
]
138191477 (kdm2ba)
03036 Chromosome and associated proteins [BR:
eja03036
]
138191477 (kdm2ba)
Enzymes [BR:
eja01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138191477 (kdm2ba)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138191477 (kdm2ba)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138191477 (kdm2ba)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138191477 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138191477 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
PHD
Motif
Other DBs
NCBI-GeneID:
138191477
NCBI-ProteinID:
XP_068994422
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MALSLSGDDEEYDSESEQQRAANRPKPKMGTSSAVKLPSNRSSSGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEDEEDK
FNFMLMECSICNEIVHPNCLKVSDASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGF
KYASNLPGSLLREQKPVKEDGDVSSAAKRRPDREETPRYRPEETLHRQPPLLSPSGLPRP
RPEDKLRKKRKLFDDEEEEDLGVRKKEKSDDPYFSKLLHQIKTEEEDEDAYDEEDEEGRE
PHFRSGIERKGRFGDAEEEGDYKDSRIDFLNPCIKTPVGDSDQSHCSSPQAGPSSEGGSE
TQEKGPRPKARRKRRLPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPETENEEPK
RLFRNGNEIGDQRAHLKTKEMNGTPWELRHFYPSPITPLGFNRSTPTNRPVPPRSPPKCV
QMERHVIRPPPISPPPDRLPLKDGKTHVIQREVWMKIFRYLTHQELCVCMRVCKTWNRWC
CDKRLWTKIDLNRCTSITPLMLSGIIRRQPVCLDLSWTNISKKQLSWLINRLPGLRLLKL
SGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVE
DLRLAGLDITDTSLRLITRQMPLLSRLDLSYCNHINDQSVNLLTAAGTTTRDSLAEINLS
VCNRVTDHSLNFFKRCGSICQIDLRFCKQVTRTACERFIAEMSVSVPFRLKEDKLLQKTS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccttatcattgagcggagacgatgaggaatatgattcagagtctgagcagcaacgg
gcagccaaccggccgaagcccaagatggggacgtcgtcagccgttaagctgccgtccaac
cgcagctcgtccggagccagacgcagaaggacgcgctgccggaagtgtgaggcgtgcctc
cggactgaatgtggagagtgtcacttctgtaaggacatgaagaagttcggcgggccgggg
cgcatgaaacagtcctgcattatgagacaatgcatcgcgcccgtgttgccccacactgca
gtgtgtgtggtgtgtaaagaagcagggaaggaggacacactcgaggacgaggaggacaag
ttcaacttcatgctaatggagtgctccatctgcaatgagatcgtccatcccaactgcctc
aaggtgagcgatgcctccggagtggtgaatgatgaactccccaactgctgggaatgtccc
aaatgcaaccatgctgggaaaagtggaaaagtattgaagcaaaaaaggggtccagggttc
aagtacgcctccaacctccctggctctttgctgagggaacagaagccagtgaaggaggat
ggggacgtttcctctgcagccaagaggagaccggaccgggaggagacacccaggtacaga
ccagaggagaccctccaccgacagccaccgctgctctcccccagcggcctgccacggccc
aggcccgaggacaaactgaggaagaagaggaagctgtttgatgatgaggaggaggaggat
ctcggcgtgaggaagaaggaaaagtcagatgatccctacttttccaaacttctgcaccaa
attaagacagaagaggaggatgaagacgcttatgacgaagaggacgaggaaggacgggag
cctcacttccggagtggcattgagaggaaagggcgttttggagatgctgaagaagaaggg
gattacaaagattccaggattgactttttgaatccctgcattaaaacaccggttggagac
agcgaccagtctcactgcagctctccacaggccggccccagcagcgagggcggaagtgag
acccaggaaaaaggcccacgtccaaaggctcgccgcaagcggcgtttacctaatagagag
ctgagccgagagctgagcaaagctctgaaccaggaaatccagaagacggaggactgcctg
gccaacgagaaccggcagcccctcaaagtggaacctgagacggagaacgaggagcccaag
aggttgttccgcaatggtaatgaaatcggagaccagagggctcacctcaagaccaaagag
atgaacgggaccccctgggagctgcgccacttctatccgagcccgatcaccccgctgggc
ttcaacaggagcaccccaaccaaccggccggtgcccccacgctccccacctaagtgtgtc
caaatggagcggcacgtcattcggccccctccgatcagcccgcctcccgacagactgccg
ctgaaagacggcaaaacacacgtcatacagcgtgaggtgtggatgaagatatttcgctac
ctcacacaccaggagctgtgtgtctgcatgagagtctgcaagacgtggaacagatggtgt
tgtgataaaagactttggacaaagatcgatctgaaccgctgcacctccatcactccactc
atgctaagtgggattatccgccgacagccagtttgcctggacctcagctggaccaacatt
tccaagaaacaattaagctggcttattaatagattgccaggcctgcgactgttaaagtta
tcgggctgttcctgggctgctgtatctgcactctgcacctccagctgccctttgctgcgc
accctggacgtccagtgggtggaggggctcaaagacgcgcagatgagggacctcctgtcg
ccccccacagacaacagaccaggtcaattggacaaccgctgcaagctgcggaacgtggaa
gacctgcggctggcggggctggacatcaccgacacgtcattacgtctcatcactcgacag
atgcctctgctctccaggctagacctgagctactgcaaccacatcaacgaccagtcagtc
aacctgctgacagcagcagggactacaaccagagactcactcgcagaaatcaacctgtca
gtgtgtaaccgcgtcacagaccattccctaaactttttcaagcggtgtggaagcatctgt
cagatcgacctccgcttctgcaagcaggtgacgaggacggcgtgcgaaaggttcatcgca
gagatgtctgtgagcgtgccgttcaggctgaaagaggacaaactgctgcaaaagacaagc
tag
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