Embiotoca jacksoni (black perch): 138193820
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Entry
138193820 CDS
T10523
Symbol
abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja02010
ABC transporters
eja04146
Peroxisome
eja04977
Vitamin digestion and absorption
eja04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138193820 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
138193820 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
138193820 (abcd4)
04980 Cobalamin transport and metabolism
138193820 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138193820 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eja02000
]
138193820 (abcd4)
Enzymes [BR:
eja01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
138193820 (abcd4)
Membrane trafficking [BR:
eja04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
138193820 (abcd4)
Transporters [BR:
eja02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
138193820 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
DEAD
AAA_5
FtsK_SpoIIIE
NACHT
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
138193820
NCBI-ProteinID:
XP_068998166
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MPRLEKSNGKGTKRLKLDWRFVQRFCSIQKVLFPSWTSQSVLMFGTLLVVTLTEQLIIYQ
VGVLPSRFYNVLADKDFSGFRSLVGTALTLILLNSSLKSIDQYICNQMYVRWRKMLTESL
HSAYFQGRVYYTLNVLREDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLTYYTYHCF
HSTGWIGPVSIFGYFVIGTVANRILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTDRRLQALMLTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGVYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNVHAGPADTAFILDHLSYKSPYSDQLLVEDLSLKISQGTNLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYLTDGSLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVSSLLQRTGGLDEKVEWNWYDVLSPGEMQRLCFARLFYL
QPQYAVLDEATSALTEEAEAQLYRTCKQLGMTLVSLGHRSSLEKYHDVQLKLCGGGRWEL
TNLRESGGGLREEDM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttggaaaagtcaaacggcaaagggacaaaaagactgaagttagactggagg
tttgttcaaaggttctgcagcatccagaaggtcctgttcccgtcatggaccagtcaaagt
gtcctgatgtttgggactttgcttgtcgtcactctgacagaacagctgatcatttaccag
gtgggtgtcctccccagtcgcttctacaacgtgctggcagacaaagatttctccggcttc
aggagtcttgtgggcacagcgctgacgctcattttactcaactcttctctaaaaagcatc
gatcagtacatttgcaatcagatgtatgtcaggtggaggaagatgctgactgaaagcctc
cattcggcctacttccagggcagagtctactacacacttaatgttctcagagaggacatc
gataacccagaccagcggatcagtcaggatgcagagaggctgtgtaagcagatgagcacc
atggcgagtcgtctgattgtctctccgttcacactgacttactacacctaccactgcttt
cacagcaccggctggatcggtcctgttagtatctttggctactttgtaatcgggactgtt
gccaatagaatcctgatggggccaattgtgtcaacgttgtttgagcaagaaaaactggag
ggagacttcagattcaagcacatgcaaatccgtgtcaatgcagagtctgcagctttttac
agagccggtaaagtggagcacatgaggacggaccgaagactgcaggctctgatgttgact
caaaagagtctcataaacaaagagctctggctttatattggggtgaacacgtttgactac
cttggaggttttctcagctacattataattgccattcccatctttactggtgtttatgat
ggtctcactcccggtgaactcagtgcactcatcagtaagaatgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaactactctgtcagatgtggctgga
tacacccacaggattggggagctgcgggaggtgatggatgacatcctacgcaagcagtgc
gactacgaccctgcgtcaggggaaagctacgactttgacagtgacttcaatgtccacgct
ggccctgcggacactgccttcatcctagaccatctctcatacaaatcgccttactctgac
cagctgctggtagaagacctgagtctgaaaatcagtcagggaaccaacctgctggtggtg
gggaacacgggcaccggcaagacgtccctactgcgggtccttaaccgactctgggaagca
cacagcggttttgtccagatgaccacgtgtttcgggcccagaggaaccctcttcctgcca
cagaaaccctacctgactgatggctcactgcgtgaacaggtgatctacccactgaaggac
atttaccctgcatcagggtcagtcgatgatgacagaattatacaattcctcgaacttgct
ggagtgtctagtctccttcagcggaccggtgggctggatgaaaaagtggaatggaactgg
tatgatgttctgtctccaggcgaaatgcagcgactctgctttgcacgactcttctatctg
cagccccaatatgccgttttagatgaggccaccagcgcattgaccgaggaggcggaggca
caactctaccgaacctgtaaacagctgggcatgacgttggtcagtctgggacaccggagc
agcctggagaagtaccatgatgtccagttgaagctgtgtggaggaggccgatgggaatta
accaatttaagagaatctggagggggtctcagagaagaggacatgtga
DBGET
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