KEGG   Embiotoca jacksoni (black perch): 138195281
Entry
138195281         CDS       T10523                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138195281 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eja03041]
    138195281 (smndc1)
Spliceosome [BR:eja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    138195281 (smndc1)
 Complex B
    138195281 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    138195281 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 138195281
NCBI-ProteinID: XP_069000666
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLVKQLNSYKAQLQQVEVALSTDQDNEDLLKLQKDLQEVIDLTKDLLTSQPTDGTSN
TSGSETVPKKHGWKVGNRCMAVWSQDGQVYEAEIEEIDRENGTAAVTFIEYGNAEVIPLQ
NLKVVEEGKRSDEDGNSKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtccgaggacttggtcaaacagttgaacagctacaaagcccagctgcagcaagtagaa
gttgccttatctactgaccaagacaatgaagacctcctcaaacttcagaaagacttgcag
gaagtcatcgatttgacaaaagaccttctgacctcgcaacccaccgatggcacttccaat
accagcggctcggagacggtccccaagaagcatggttggaaagtgggaaacaggtgtatg
gctgtgtggagtcaggacggacaggtgtatgaggctgagattgaggagatagaccgagag
aacgggaccgcagccgtaaccttcattgagtacgggaatgccgaagtgattcctctccag
aacctcaaagtcgtagaggaggggaaacgttctgacgaggatggcaactcgaagccaaaa
tcgaggaaagagcagatagcagagcagagggagtataagaagaagaaagcccagaagaag
gtgcagaggatgaaggagttggagcaagagagagaggagcagaagtcaaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgca
tcaccagaaagcgtaaacggaaaggtgggagtgggaacatgcggtattgcagacaaacct
atgacccaatatcatgacacgtccaaatacaatgtaagacatctaatgccacaataa

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