Embiotoca jacksoni (black perch): 138196072
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Entry
138196072 CDS
T10523
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138196072 (ttc3)
Enzymes [BR:
eja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138196072 (ttc3)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138196072 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
TPR_2
zf-rbx1
TPR_BSK1_C
zf-C3HC4
zf-C3HC4_2
TPR_16
TPR_11
zf-RING_UBOX
TPR_17
TPR_1
zf-RING_11
zf-ANAPC11
TPR_19
zf-RING_Vps41
TPR_CcmH_CycH
zf_RING_Vps8_fungal
CUE
ANAPC3
TPR_8
Motif
Other DBs
NCBI-GeneID:
138196072
NCBI-ProteinID:
XP_069001876
LinkDB
All DBs
Position
Unknown
AA seq
1756 aa
AA seq
DB search
MSDLDSDSDYDGDWNESTQQPKLAYGNIITFRPSEELFERWSHIPDDTKRDAGQRMKVCA
LWLPVLLQYEESNTAACWAVEIGLINATDSEELNLKHLRKIETVESILRALERGTLKKDT
TKQVIWISNLFNLNRSQEVLDDALCWLERTGEPNIRFKLLGLGAKHTCITALHLIFTEFA
KYIYEMAGNLEKTMKSLMARPDDYLIEKSEEMKKKGNENFQKQQYEDAVKFYSKAIKYYP
DNHIIYGNRALCYIRAKKYLKAAGDGKRATVIKPLWAKGHYRYCEALFSLGDIKMALDAN
RSAQLLCNDDCEGFKDLEQQHQKFITELTDVTGGWLKKPSNKSFKVGSSVSQLQSGKAAS
KINAAANRASKGSEVKMEKQSGKNERPAKAEGGAKGSKPSKSEFSSKNGKREFNTTPKKK
SKIRNSPAEEEQVADGKAGACKDLMSMVQDAHIALTDLRSRNAAQAFSKALTLLETITPK
ELGLSTQDVLLLLFGRATALTEIGQPEELAEAQKLLQKMKSFEERMFQCLVYYAMGRVYL
RENRFAVALEKFSDSLQMVKNQIMPGKLTWPLTKEIVKETQPDFFKEILEDAIELCKFPP
VPDAFCCLDKCLGSLKAEIYFNDPDFKGFIQICCCQSCTVDYHIACWKSLKTSSFSDKNE
KDFLQEACLTPDCFGQICSIKIYGPTGLVKCKFEVSISKPKTQKKPRVNQKCTSCWMCCL
SPDCSLKKLKSKEEHKLKKKLHKQSFQDKQAINDEILQKKEESATPGQQKAWLLYRDRVL
LQICQNLELLREEKNLHVSALTSSLQPWLELDSSRGNQLAGRILDWEREPLDTLGHAVEL
LLERKNRVWARVFIQLLSSCVGVNPKLNIWACRLNDAGLNAAQSFIERHAAHLEQLDLAL
LLPFSPLQDMIIEKLGARQELFSSIGLTMTEYLKQAPPHDMRLFIWTLEEHRDDYVSCHS
ILDEYFDMMDGHCSVLKKSDENQNNSPMKSKSRGRKKKQKEPKGVIVLSGMRSVTPREEW
DQDLLEDDSLSFLDPVDPFGVPSRIREQVADFEVQYNDTRRGSHYKKILDNNPDPTKESL
YDYFDQILDEHGPLVAEDPLLTGELDNFPAVAQQKIQEAGGFEHFLLESLRFIKMGRCIG
LAKHAVSLQQAGHGAGLDDLDDLDVAVDDGSQPPGLHEASGTGFYLNIYSSSQTEVHPIL
PNPYVFEYPSTGSQPWTRGENQQLYFLPTDDGELDLYSAEAGLQDPTTDGAASMTADENF
GKRHAAVQTCQDAMRSVAVNTELYERFESCQGDLIKKEKSNRKLEQQIEDMMNSFDVVDP
AVREELGSLEEDIQKITANIQVTNTELSLFQHKLEEEVKKDQKEKKANQEVLKSLKVETD
ELVEEQRSLSITIREKKSSYESRLNEFLELGNQSAAEKMSLEDEIKRCGALLASASRRSG
TAQLSVVESSRDQLLHGFYRELADTKTFLSKLDEAVHRNPNQELDQIRISCRAKVEEVEK
RISSAEQQYQEQMVQVKNGRRVSELLPVSVGNQQEAAAAPLSAAAAKNVAPPPLAPPPKP
AATPPAKAPPAPTQLKPASRTLEPPYGTVFDKAMESLSAMFPDYSRSNLMRFLQELRSST
GGSLSSPALQEVVSGATTLILDHQDRLSSARSNVVGRGSPAQCATPPLVIPPPPVWQQVP
PHRASNSKGLNMEDPCIICHEDMSPEDTSVLACRHSFHDKCIRSWLKEQSTCPTCRNHAL
LPDDFPALSGRRRPAP
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttagactcggactctgactacgacggagactggaacgaatccacgcagcag
ccaaaactagcatacggaaacatcatcaccttccgtccatcagaagagcttttcgaacga
tggagtcacatccccgacgacaccaagagagacgccggccagaggatgaaggtttgcgcc
ctctggcttcccgtcctgctgcagtacgaagagtccaacacggccgcctgctgggccgta
gagatcgggctcatcaacgccaccgacagcgaagaactgaatctgaagcatctccgtaag
atagaaacggtggaatccatcctgcgagcgctggagagaggaacgctgaaaaaggacacg
acgaaacaggtcatctggataagcaacttgtttaatttgaatcgctcccaggaggtgctg
gacgacgctttgtgctggttggaacgaacgggagaacccaacattcgcttcaagctgctg
ggcctcggcgccaaacacacctgcatcacggccctccacctcatcttcactgagtttgca
aagtacatctacgaaatggccggcaacctggagaagaccatgaagtctctgatggctcga
ccggacgactatctgatagaaaaaagtgaagaaatgaagaagaaaggaaacgagaacttt
cagaagcagcagtacgaagatgctgtgaagttttattctaaagccatcaaatattaccct
gacaatcacatcatttatggaaaccgagctctgtgttatatccgcgctaagaaatatcta
aaagcagccggtgatggaaagcgtgcaacggtgataaaacctctgtgggcaaagggtcac
taccgctactgcgaggccttgttctccttaggagacattaaaatggctctggatgccaac
cgctcggcccagctgctgtgtaacgacgactgtgaggggttcaaagacctggaacagcag
catcagaagttcatcactgaactcaccgacgtcacaggtggatggctgaagaaaccctca
aataaaagttttaaagtgggttcatctgtatctcagctgcagtctggaaaagctgccagt
aaaatcaacgcagcagcaaacagagcttcaaagggttcagaggttaaaatggaaaagcag
tctgggaaaaatgaaagaccagcaaaggcagagggcggagctaaaggctctaaaccatca
aaaagtgagttttcttcaaagaatgggaaacgagagttcaacacgacaccgaagaagaag
tcaaagatcagaaacagtccggctgaagaagagcaggtggccgatggtaaagccggagcg
tgtaaagacttgatgtcgatggtgcaggacgcccacatcgccctgacggacctccgcagc
cgcaacgcagcgcaggccttcagcaaggcgctgaccttactggaaaccatcacacccaag
gaactcggactttccacacaggacgtactgttgttgctgtttggacgagcgacggctctg
acagaaatcggccagcctgaggaacttgcagaagcacaaaagctcctgcagaagatgaaa
tcattcgaggagaggatgtttcagtgcctggtttactacgccatggggagggtttatctc
agagaaaaccggtttgcagttgctctggagaagttttcagattccctgcagatggtgaag
aatcaaataatgccgggtaaactcacctggcctttaactaaagagatagtcaaagaaaca
cagccagactttttcaaggaaatacttgaagacgctatagaattgtgcaaattccctcct
gttcccgatgccttttgttgtcttgacaaatgcctcggctcattaaaggctgaaatctac
ttcaacgacccagattttaagggcttcattcaaatatgctgctgtcagagctgcacggtt
gattatcacatcgcctgttggaagtctctgaagacctcaagtttctctgacaagaatgaa
aaggatttccttcaagaagcatgtttgactccagactgtttcggacaaatatgtagtatc
aaaatctacggtccaacgggcctggtgaaatgtaagtttgaagtttcaatttctaaacca
aagacgcagaagaagccaagagtgaatcagaaatgtaccagctgctggatgtgctgttta
tcaccagactgcagtctaaagaagttaaaatcaaaggaagagcacaagctgaagaagaag
ctgcataaacagtcgtttcaggataagcaggcgatcaacgatgagatcctgcagaagaaa
gaagaatcggcaactccgggtcaacagaaagcctggttgctgtacagggatcgagttctt
ctgcagatctgccagaacctggagctcctgcgggaggagaagaacctccacgtctccgct
ctgaccagcagcctgcagccgtggctggagttggactcgtccagggggaaccagctcgcc
gggaggatcctggactgggagcgggagccgctggacactctgggtcacgctgtggagctg
ctgctggagaggaagaaccgggtctgggctcgtgtctttattcaactgctcagtagctgt
gtgggtgtgaatcctaaactgaacatctgggcctgtcggctcaacgatgcaggcctgaat
gctgcccaatctttcatcgagcgtcacgcagcacatctggagcagctggacttggctctt
ctgctgcccttcagcccgttgcaggacatgattatagagaagctcggcgctaggcaggag
ctgttttctagcattggcttgactatgactgaatacctaaaacaggctccgcctcatgac
atgagactcttcatctggactctggaggagcacagagacgactatgtctcctgccactct
atactggatgaatattttgatatgatggatggacattgttcggtcttaaaaaagtctgat
gaaaatcaaaataattctcctatgaagtctaagagtcgaggccggaaaaagaaacagaaa
gagccaaagggtgttatagttttgtctggcatgagaagcgtaactccaagagaggagtgg
gaccaagaccttttagaagacgactctttatcattcctcgaccccgttgatcccttcggc
gttcccagtcgcattcgagagcaagtggccgactttgaggtccagtacaacgacacccga
cgcggaagtcactataaaaagattttggacaacaaccccgacccgactaaagagagtttg
tacgactacttcgatcagatcctggatgagcacggccccctggtggccgaggacccgctg
ctcacgggcgagctggataatttccccgccgttgctcagcagaagatccaggaagcgggc
ggcttcgagcacttcctcctggagtccctccgcttcataaagatggggcggtgcatcggg
ctggccaagcacgccgtgtcgctgcagcaggccggtcacggagccggtctggacgacctg
gacgacctggacgtcgccgtggacgatggctctcagcctcccggtctgcatgaagcctca
ggaactggtttctatttgaacatttattcctcctcccagactgaagtccatcccatcctc
ccaaacccgtatgtattcgagtatccgtcgacaggaagtcaaccctggacccgcggcgaa
aatcagcagctttactttttacctaccgacgacggggagctggacctttactccgctgag
gcgggtcttcaggatccgactaccgatggagccgcttcgatgacggctgatgaaaacttt
gggaagagacacgcagcagtgcagacgtgtcaggacgccatgaggagtgtcgcggttaac
acggagctgtatgagcgtttcgagagctgccagggcgacctcatcaagaaggaaaagagc
aacaggaagttggaacagcagatcgaggacatgatgaacagctttgacgtggtggacccg
gctgtcagagaagagctgggctcgctggaggaggacatccagaagatcaccgctaacatc
caggtgaccaacacggagctgtcgctgttccagcacaagctggaggaggaggtgaagaag
gaccagaaggagaagaaggccaaccaggaggtgctgaagtccctgaaggtggagacggac
gagctggtggaggagcagaggagtctgtccatcaccatccgggagaagaagagcagctac
gagtccaggctgaacgaattcctggagctcggcaaccagtcggcagcagagaagatgagt
ctggaggacgagatcaagcgctgtggagccttgttggcctcggcctccaggaggtccggt
acagcccagctgtcggtggtggagagcagtcgagatcagctgctgcacggattctacaga
gagctggcagacaccaagaccttcctcagcaaactggacgaggcagtacaccgaaaccca
aaccaggagttggaccagatccggatcagctgcagagccaaagtggaggaagtggagaag
agaatctcgagcgctgagcaacagtaccaggagcagatggttcaggtgaagaatggacgc
cgagtcagcgagctgcttcccgtcagcgtcggcaaccagcaggaagctgcagcggcaccg
ctctctgcagcagcagctaaaaacgtggctcctccgcctttggctccgccccccaagcct
gccgccacgcccccagccaaggctccgcccgctccgactcagctcaaacctgcgagcagg
acgctggagcctccgtacggcaccgtgttcgacaaggccatggagagcctgagcgccatg
ttccccgactacagccgctccaacctgatgaggttcctgcaggagctgcggtcctccacc
ggggggagtctgagcagcccggctctgcaggaggtggtgagcggagccacgacgctcatc
ctcgaccaccaggaccgactcagctctgcccggtccaacgtcgtgggtcgagggagtccg
gctcagtgtgccacgccccctctggtgatccccccccctccggtgtggcagcaggtccca
cctcacagggcctcaaactccaaggggctgaacatggaggacccgtgcatcatctgccac
gaggacatgagtccagaagacacgagtgtgctggcgtgtcgacacagtttccacgacaag
tgtatccgttcgtggctgaaggagcagagcacctgtcccacctgcaggaatcacgctctg
ctgcccgacgacttccccgcgctgtccgggaggagacggccggcgccgtga
DBGET
integrated database retrieval system
