Embiotoca jacksoni (black perch): 138199819 Help Entry 138199819         CDS       T10523                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism eja  Embiotoca jacksoni (black perch) Pathway eja04115   p53 signaling pathway eja04145   Phagosome eja04148   Efferocytosis eja04350   TGF-beta signaling pathway eja04510   Focal adhesion eja04512   ECM-receptor interaction eja04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:eja00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     138199819   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     138199819  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     138199819    04148 Efferocytosis     138199819   09143 Cell growth and death    04115 p53 signaling pathway     138199819   09144 Cellular community - eukaryotes    04510 Focal adhesion     138199819   09142 Cell motility    04820 Cytoskeleton in muscle cells     138199819  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:eja04131]     138199819   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:eja00536]     138199819 Membrane trafficking [BR:eja04131]  Endocytosis   Phagocytosis    Opsonins     138199819 Glycosaminoglycan binding proteins [BR:eja00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138199819 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 EGF_CA TSP1_ADAMTS cEGF TSP1_CFP_C EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  138199819 NCBI-ProteinID:  XP_069008143 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MKLCVIFLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPNSPAYKV LNADLIPSIPDSSFRDLLDSIQAERGFLLLVNLKQFKKNRGSLLTIEKIDGSGPVFEIIS NGKANTLDVVFSTADQQHLVSIEDAVLATGHWKNITLFVQDDQAQLFVGCEEINISELDV PIQTVLSREVANIARLRIGKGAVKDKFMGVLQNVRFVFGTTLNAILRNKGCQSGAALTDV MTLDNPVNGSSPAIRTEYTGHKAKDLQTVCGFSCDDIAGMFKELRGLNVVVKQLSNELQK VTEETIILKNSMNIHNQVCIHNGIMHKDKDEWTVDGCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGPPNDYAEDGWSAWSDWTHCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITQIRLCNSPTPQMGGRDCQGEG RQTKICKKSPCPVNGGWGPWSPWDTCSATCGGGNQIRKRLCSDPAPKYGGKDCVGDAAVS QICNKEVCPVDGCLSSPCFPGTKCISFPDGSFNCGRCPLGFTGDGVTCKDIDECKEVPNA CHTHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCRARNPCQDGSHNCN KNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPKVYNPAQYDTDRDDIGDRCDNCV FESNTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDHDD DNDGIPDNKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVLDIHDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSPTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI HDKTYAGGRLGLYVFSQEMVYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgtgtgtcatctttttgctgttgatgctgtggagttgtgaaggcgcaagactg gcagagagtcgggatgataacagtgtgtatgacttgtttgatctggcccgagtaaacaag agacatcacggagtgagtttggtcaaaggcgcagatcccaacagccccgcatacaaggtc ctgaacgcagacctgatcccctccatccccgacagctccttcagggacctcctcgactcc attcaggccgagcggggcttcctcctcctggtcaacctgaagcagttcaagaaaaacagg ggcagccttttgaccatcgagaagatcgacggatccggacccgtcttcgagatcatttcc aacggcaaggcgaacacccttgatgtggtcttctccaccgcggaccagcagcatctcgtg tccatcgaagatgcagttttggccactggccactggaagaacatcacgctgttcgtgcag gatgaccaggcgcaactttttgtcggctgtgaagaaatcaatatctcagagttggatgtg ccaatccagacagtgctgtcccgggaggtggcaaacatcgccaggctcaggattggaaag ggagcagtgaaggacaagtttatgggagtgcttcagaatgtgcgctttgtctttggtacc actctgaatgccatcctgagaaataagggatgtcaaagtggagcagctctaactgatgtc atgaccctggacaacccagtcaacggctccagccctgccattaggaccgaatacaccggc cacaaagccaaagatctgcagactgtctgtggcttctcctgtgacgacatcgccggcatg tttaaggagctccggggactcaatgtggttgttaaacagctgtcgaatgagctccaaaaa gtgactgaggaaaccataatcctgaaaaattctatgaacatccacaatcaagtctgcatc cacaacggcatcatgcacaaagacaaagatgaatggaccgtggacggttgcactgagtgc acctgccagaactctgccaccgtgtgtcgtaaaatctcctgcccgctgatcccatgtgcc aacgccactgtgcccgacggcgagtgctgccctcgctgtggaccaccaaacgactatgca gaggatggctggtccgcctggtctgactggacccactgttcggtgacttgcggccgtggc atccagcagcgtggccgttcctgcgaccgcatcaacagcaagtgtgagggcacctctgtc caaacccgtgactgctacccacaggaatgtgacaaacgcttcaagcaggatggaggttgg agccactggtcaccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacccag atccgcctctgcaactcccccacaccccagatgggtggcagggactgccagggagaggga cgtcaaaccaaaatctgcaagaagtctccatgtcctgtcaatggaggttggggaccttgg tcgccatgggacacctgctctgctacctgcggtggaggaaaccagatccggaagcgtctt tgctctgaccccgcccccaaatacggaggaaaggattgtgttggtgatgctgctgtgtct caaatttgcaacaaagaagtctgccctgttgatggctgtctgtccagcccctgcttcccc ggcacaaagtgcatcagcttccccgatggctctttcaactgtggcagatgtccacttggc ttcactggggacggtgtaacctgcaaagacattgacgaatgtaaagaggttcccaatgcc tgccatacacataacggagtccatcgctgtgagaacactgagccagggtacaactgtctt ccctgccctgcacgtttctccggtcctcagccctttggaagaggagtggaacaggcaact gccaaaaaacaggtttgcagagcccgtaacccttgtcaggacggcagccacaactgcaat aaaaatgcaaactgcatctacttgggtgtcttctccgagtccatgttccgctgcgagtgc aagccaggttatgccgggaacggccggatctgcggcgaggacagtgacctggacgggtgg cccaacactgacctgctgtgtgtggagaacgccacttatcactgcaagaaggataactgc cccaaccttcccaactctggtcaggaagatcatgacaaagacggcctgggtgatgaatgt gaccatgatgatgacaatgatgggatccccgatgatagggacaactgtccaaaagtgtac aaccctgctcagtatgacacagacagagatgatatcggcgatcgctgtgacaactgtgtg tttgaatccaacactgaccaaactgacaccgacaacaacggagagggtgatgcctgtgct gttgatattgatggcgatggtattctgaatgagaatgacaactgcccgtatgtttacaac gtggaccagagagacactgacagagacggggtgggagaccattgcgataactgtcctctg gagcacaaccctgatcagatcgactctgactcagatcgcattggagacaagtgcgacaac aatcaggacattgatgaggatggtcaccagaacaacttggacaactgcccctacatcgcc aacgccaaccaggcagaccacgacaaggacggcaagggcgacgcctgcgaccatgatgac gacaatgacggcatccccgacaacaaagacaactgtagactggcctttaaccctgatcaa ctggactctgatggcgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaat gtcctggacatccatgatgtgtgcccggagaactttgccatcagtgagaccgacttccgc cgattccagatggttcctctggatcccaaaggcacctctcagatcgaccccaactgggtg gttcggcatcagggcaaggagttggtgcagactgtcaactgtgaccctggcattgctgtt ggttacgatgagttcagcgcagtggatttcagtggaacgttcttcatcaacacggacaga gatgacgactacgccgggtttgtgttcggctaccagtccagctcccgcttctacacggtg atgtggaaacagatcacacagacctactggtcccccacacccacaagagctcaaggctac tctggcttgtcaatcaaagtagtcaactccaccacagggcccggtgagcacctgaggaac gccctgtggcacactggagacaccccaggacaggtccgcactctgtggcacgaccccaag aacatcggctggaaggacttcactgcctatagatggcatctgacccacagacccaagact ggacttattagagtggtcatgtatgaaggcaagagaatcatggccgattctggaaacatc cacgacaagacgtacgctggtggacgactgggcttgtacgtcttctctcaggagatggtt tacttctcggacctcaaatacgaatgcagagattcctaa

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