Embiotoca jacksoni (black perch): 138205162
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Entry
138205162 CDS
T10523
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
eja Embiotoca jacksoni (black perch)
Brite
Membrane trafficking [BR:
eja04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138205162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138205162
NCBI-ProteinID:
XP_069017014
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Position
Unknown
AA seq
1788 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETENLDRQGMFMGGGPDPDTISLASVTAVTTNVSNKRSK
PDIKMEPSSGRPVDYQVSVTVIEARQLIGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGMFKLDVGTIYYQPEHQFYHKWALL
TDPDDITAGCKGYVKCDIAVVAKGDNIKTPHKANEQDEDDIEGNLLIPEGVPAERQWARY
YLKIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWN
EQIVFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLRTISNDGDKGFLPTLGPAWVNM
YGSTRTYSLMDEYQELNEGQGEGVSFRARLLVSLGVEILDPSSPDITSSTDVQLEGVPNI
SETATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGVAKPKGKKGNSDE
EETELIHNSSDEEMDNDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQR
RRLFNANIIDNIADQLEDGLNDVQEIIKTEKAYPERRLRGVLEELSQGCSQFLSLANQDQ
NQAGRTKLDRERLKLCMSEVENIGQQAKAMRSQVKKSTVRDKLKLAQNFLSKLRFLANEP
QHSVPDVFIWMICNGKRIAYARVPSKDILFSSIDEEQGKDCGKVKTIFLRIPGKKGFGPA
GWTVQSKIEIYLWLGLNRQRKDYLSGLPNGFEENKLSRGPGLPCSPPISLTYMMKQIFQL
RVHMYQARSLFAADSTGLSDPFARVFFSTQTQVTEILAETLCPTWDQLLVLENVELFGEA
TELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGN
CTAGEMLAAFELLQIGPNGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKYRIEVLFWGL
RDLKRVNLAQVDRPRVDIECAGKGIQSALISNYKKNPNFSTLVKWFEVDLPENELLHPPL
NIRVVDCRAFGRYTLVGSNAVTTLRKFIYRGADKQANNYTTTEEIIVVNMEPDPACKKME
TVVKLDSCSDAVVKVEDDDKDGKGKKKKRKKGDEAEEEELDESMLDWWSKYFVSIETLTE
ALKAQEAALSDSEDKEDADITDGDIKPDDSPVKGTKRGKGKKKRQVLDPFEKKKPKLDEL
KVYPKELEGEFDSFEDWLHSFNLFRGKGGDDDDQNVTDEDRIVGKFKGSLCMYKVSDDTQ
RDMSFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIRLGKTEIKDK
ENYISKQLNPLFGKSFDVEATFPMDSTLAVSIYDWDLVGTDDLIGETKLDLENRFYSKHR
ATCGITRNYAIHGYNVWRDPMKPTQILAKLCKEGKLDGPHYGPGGRVKVENRVFMAPTEI
EDENGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMWVD
MFPKDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQ
QEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIPIRLN
LQVWDADHFSADDFLGAIELDLNRFPRGAKTPKQCSIEMVTNESEMPTVSIFKQKRIKGW
WPFVARNEDDEFELTGKVEAELHLLTGEEAEKSPVGEGRNEPDPLEKPNRPDIALLWFLI
PFKAAKHLLCDQYRWLTIKIVTALLLLAILGLFLYNMPGYMVKKMLGA
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgcggacacaaagaggaccgaaacggagatgagccagcgatt
ctggagacggagaacctggaccggcagggcatgttcatgggaggaggccccgacccggac
accatctctctggcctcggtcaccgccgtcaccaccaacgtgtccaacaagagatcaaaa
ccggacatcaagatggagccgagctccggccgaccggtggactaccaggtcagcgtgacg
gtgatcgaggcgcggcagctgatcggactgaacatggacccgatggtgtgcgtggagatc
ggagaggacaagaagtacacatcgatgaaggagtccaccaactgcccgtactacaacgag
tacttcgtgttcgacttccacgtccctccagacgtcatgttcgacaaaatcctgaagctc
tcggtgatccactccaagaacctgctgcgcagtggaacgctggtggggatgtttaaactg
gacgtcggtaccatctactatcagccagaacatcagttctaccacaaatgggccctgctg
acggaccctgatgacatcacagcggggtgcaaaggctacgtgaagtgtgacatcgccgtc
gtggctaaaggcgacaacataaagacgcctcacaaggccaatgaacaggacgaggatgac
atcgaagggaacctgctgatcccggaaggggttcctgcggagcggcagtgggcccggtac
tacctgaagatctaccgggccgaggggctgcccaggatgaacaccagcatcatggccaac
gtcaagaaggccttcattggggagaacaaggacctggtggacccgtacgtccaggttctg
ttcgctggacagaaggggaaaacgtcggtgcagaagagctgctacgagcccatctggaac
gaacagatcgttttcaccgagatgtttccgccgctctgcaaacgcatgaagatccagatc
cgcgattcggacaaagtcaacgacgttgccataggaacgcacttcttggacctgcggacg
atttccaacgacggcgacaaaggcttcctgcccacactgggccccgcctgggtcaacatg
tacggctccacccgcacctactccctgatggacgagtaccaggagctgaatgaggggcag
ggggagggcgtgtccttcagggcacggctgctcgtcagcctcggcgtggagatcctggac
ccctcctcccccgacatcaccagctccacggacgtgcagctggagggggtgcccaacatc
tcggagaccgccacggggaaggtggaggagttcttcctgttcggatcgttcctggaggcg
accatgatcgacaggaagatcggagataagcccatcaacttcgaggtcaccataggctac
tatggaaacgagatcgatggagtcgctaagccgaaggggaagaagggcaacagcgacgag
gaggagacagagctgatccacaactccagcgacgaagagatggataacgatggagacctg
acctccgtggccacgactccgcccatgaagcccgtcatcaccgaccggaactacttccac
ctgccgtactttgagaggaagccgtgtatttacatcaagagttggtggcaggatcagagg
aggaggctgttcaacgccaacatcatcgacaacatcgccgaccagctggaggacgggctg
aacgacgtgcaagagatcatcaagacggagaaggcgtatccggagcggcggctcagaggt
gtcttggaggagctgagccaaggatgcagtcagtttctgtcgttggccaaccaagaccag
aaccaggcgggccgaaccaaactggaccgggagcgtctgaagctgtgcatgtcagaagtg
gagaacatcggtcaacaagccaaagccatgaggtcgcaggtgaagaagagcaccgtgaga
gacaaactcaaactggctcagaacttcctgtcaaagctgcgcttcctggctaacgagcct
cagcacagcgtccccgacgtcttcatctggatgatctgtaacgggaagcgcatcgcctac
gcccgcgtcccctccaaggacatcctgttctccagcatcgatgaggagcagggaaaggac
tgcggcaaggtcaagaccatcttcctccggatcccagggaagaaaggttttggacccgcc
ggctggacagtccagtccaagatcgagatttatctgtggctcggtctgaaccggcagcgt
aaggactacctgagcgggctgcccaacgggttcgaggagaacaagctgtccagaggaccc
gggctgccgtgctcgccacccatcagcctcacctacatgatgaagcagatcttccagctc
cgggtccacatgtaccaggcccgcagcctgttcgccgccgacagcaccggcctgtccgac
cccttcgccagagtcttcttctctacgcagacccaggtcaccgagatcctggcggagacc
ctctgccccacgtgggaccagctgctggtgctcgagaacgtggagctgttcggagaggcc
accgagctgagagacgacccgcccatcatcgtcatcgagatctacgaccaggacaccgtg
ggtaaagctgacttcatgggccggacctttgcaaagcccgtcgtgaagatggcggacgag
cactacggtccgccgcgcttcccgccacagctggagtactatcagatctaccgagggaac
tgcactgccggagagatgctggcagccttcgagctgctgcagatcggacccaacggaaag
gccgacctgcctcccatcgacggtcccacagatatggaccgcggccccatcctgccagtc
ccgctggggatccgacccgtgctcagcaagtatcggatcgaggttttgttctggggcctg
agggacctgaagagggtcaacctggctcaggtggaccggcctcgtgtcgacatcgagtgc
gccggaaagggaatccagtcggcgctcatctccaactacaagaaaaaccccaacttcagc
acgctggtcaagtggtttgaagtggatcttcccgagaacgagctgctccacccgccgctg
aacatccgcgtggtggactgcagagcgtttggacgctacactctggtcggctccaacgct
gtcaccacgctgaggaagttcatctacaggggagcagacaagcaggccaacaactacacc
accacagaggaaattattgtcgtcaacatggaacccgatccggcctgtaagaagatggaa
acggtggtcaaactggactcttgctccgatgctgtggtcaaagtcgaggatgatgacaag
gatggaaaggggaaaaagaagaagaggaagaagggcgatgaggctgaggaggaggagctg
gatgagagcatgctggactggtggtccaaatactttgtctccattgaaactctaacagag
gcactgaaagctcaggaagccgctctctcagactcagaggacaaagaggacgcggacatt
acagacggagatatcaaacctgatgactctcctgtgaaaggcaccaagagagggaagggg
aagaagaagagacaagtgctcgacccgttcgagaagaagaagccgaagctggatgagttg
aaggtgtatcctaaagaactggaaggggaatttgacagctttgaggactggctgcacagt
ttcaacctgttcagagggaagggaggcgacgatgatgaccagaacgtgacagacgaagac
aggattgttggaaagttcaaaggctccctctgcatgtacaaagtgtcagacgatacgcag
cgagacatgagcttcgactccaacatgggaatgtttcagaatatccctcacaacgacccc
atcaacatcctggtccgcatctacgtcatcagggcgactgatctgcaccccgctgacatt
aacgggaaggccgacccctacatcgccattagacttggaaaaacagagatcaaagacaaa
gagaactacatctccaaacagctcaaccctctgtttggaaaatcgttcgacgtggaggcc
acgttcccgatggactccaccctcgccgtgtccatctacgactgggacctggtggggacc
gacgatctgatcggggagaccaaactggacctggagaaccgcttctacagcaaacaccgg
gccacgtgtgggatcacacgtaactacgccattcatggttacaacgtgtggcgagacccc
atgaaacccacacaaatcctggctaagctctgcaaagaaggcaaactggacgggccccac
tacggccccggaggacgagtgaaggtggagaaccgcgtcttcatggcaccgaccgagatc
gaggatgaaaacggtctgaagaagcagacggacgaacatctcgctctgacggtgctgaag
cactgggaggaaatcccccgagtcggctgtaaactggtcccagagcacgtggagacccga
ccgctgctgcacccggacaaaccggggatcgaacagggaagaatcgagatgtgggtggac
atgttcccgaaggacatgacggctccgggccccgccctcgacatctcaccgcggaaacca
aagaagtttgaactgagggtgatcatttggaacacggatgaagtcgttctcgaggacgat
gatatcttcaccggcgagaagtcgagcgacatatttgtgcgaggctggttgaaaggacag
caggaggacaagcaggacacggacgtccactaccactcaatcaccggagagggcaacttc
aactggcgcttcgtctacccattcgactacctcatggccgaggagaagatcgtcatctcg
aaaaaagagtccatgttcgcgtgggatgagacggagtacaagatcccaattcgtctcaat
ctgcaagtgtgggacgccgatcacttctcagcagacgactttctaggtgcgatagagctg
gacctgaaccggttccctcgcggtgcaaagacccccaagcagtgcagcatcgagatggtg
accaatgaatcggagatgccgacggtgtccatcttcaaacagaagaggatcaaaggctgg
tggccgtttgtggcccgaaatgaagacgacgagtttgagctcacggggaaagtggaggcc
gagcttcacttgctgaccggagaggaagccgagaaaagtccggttggtgaaggacgaaat
gaaccggatccgctggagaaacccaaccgtccagacatcgccctcctctggttcctcatc
cctttcaaggctgcaaaacacctgctgtgtgaccagtacaggtggctgaccatcaagatc
gtcacggccctgctgctgctggccatcctgggtctgttcctgtacaacatgccgggctac
atggtgaagaagatgctgggagcttaa
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