Embiotoca jacksoni (black perch): 138206269
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Entry
138206269 CDS
T10523
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138206269 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eja03400
]
138206269 (tdg.1)
Enzymes [BR:
eja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
138206269 (tdg.1)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
138206269 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
138206269
NCBI-ProteinID:
XP_069018955
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVRSAQQFQALQTQYSNFNPNHQFHYPENPSGEAAMANPEP
VMDQQEPANLAKPAAKKRGRAAQPKEPKPPKVPKAPKAPKAPKTPKAPKPPKDPNAPKAK
PGPKPKKATEAQADGKQEKIDESFKKVKRKVDRFKGMSEEEVMKRTLPDLLDYNLDYVII
GINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTSLPVKYKMGFTNMVARAT
PGSKDLSSKELREGGKILVEKLIKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPH
KIPDCDVALYLMPSSSARCAQFPRAQDKVHYYIKLKELRDQLKGLQTSTEIEEIDYKFDL
KLAKEDAKRMAIKEEQYDPGYEDAYGGAYVERGPEGGPSEGQTNGHCTFSSATNSEGAQE
ASTSQIAEGQLPDGQWMTQSFADQIPDISGGPKDGSI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcactgcctgttgtgtccccggagtatcttcatcagtgg
gttcggtcggcacagcagtttcaagctctccagacacaatattccaacttcaaccccaac
catcagtttcactacccagagaacccgagcggagaagcagccatggctaatccagaaccc
gtgatggatcagcaggaacctgccaacttggcaaaacccgcagccaaaaaaagaggcaga
gcagcacaacccaaggaacccaaaccaccaaaagtccccaaggcaccgaaggcaccgaag
gcaccgaagacaccgaaggcaccaaaaccaccaaaggacccaaatgcacctaaagcgaaa
ccaggtccgaagcccaagaaggccaccgaggctcaggccgacggcaaacaggaaaagatt
gatgaaagcttcaagaaggtgaagaggaaagtggaccgcttcaagggaatgtcagaggag
gaagtcatgaaaaggactctgccagacctgctggactacaatctggactatgtcattatc
ggtattaatccagggctgatggcagctttcatcggacgatggtttccaggtcccggaaat
catttctggaaatgcctgtttctgtctgggtttactgaagagcagctcaaccacatgcac
gacacctccctgcctgtcaagtacaaaatgggctttaccaacatggtagccagggcgacc
ccagggagcaaagacctctcaagtaaagagttgcgtgaaggaggaaaaattcttgtggaa
aagttgataaaatacaagcctctcattgctgtattcaatggaaaatgcatctatgaaatg
ttctgcagagagatgtttggcaaaaaacccaaaaaacttgactttggtttgcagccacac
aaaatccccgactgtgacgtggctctgtatctgatgccctcatccagcgcccgctgcgcc
cagttccctcgtgctcaggacaaagtccactactacatcaagctgaaggagctccgagat
cagctgaagggccttcaaacaagcactgagatcgaggagatcgactacaaatttgacctc
aagttggccaaggaggatgccaagaggatggccataaaggaggagcagtatgatcctggt
tatgaagatgcctatggtggcgcatatgtggagagaggacctgaaggaggcccgtctgaa
ggccagaccaacggtcactgtacattctcttctgctacaaactcagagggagcgcaggag
gcgagcacgtcacaaatagcagagggccagctcccagatggacagtggatgacgcagtcc
tttgcagatcagattccagacattagcggtggaccaaaagacggcagcatatga
DBGET
integrated database retrieval system
