Embiotoca jacksoni (black perch): 138212556
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Entry
138212556 CDS
T10523
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04140
Autophagy - animal
Brite
Membrane trafficking [BR:
eja04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
138212556 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
138212556
NCBI-ProteinID:
XP_069029091
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGDCPLLAATFAYWDNILGPRVRHIWAPKGDQLMFLSDAEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQA
ELPFYLPLHIICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEDI
NIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPFPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEEDIPPDTIIHTDESFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKADLDL
TVEGDLNIVMAFAEKLRAGLHSFVFGKSFYTSVQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggctgtccgccgcagtcaccggctgtggcgaagtcggaggtcgccgtagag
ggagactgtccgctgctggccgccaccttcgcctactgggacaacatcctggggccgcgg
gtgcgccacatctgggcgccgaagggcgaccagctgatgttcctcagcgacgcagaggtc
acgtttttggcgaatcacacgctcaacggggagattctgcgcagcgccgagtgcggcgcc
gtggacgttaagttcttcgtcctggcagagaagggcgtcatcatcgtgtccctcatcttc
gacggcgagctgaagggggacaagaacacgtgcgccctgtccatcatcctgcctcaggcc
gagctgcctttctacctgccgctgcacatcatctgcgtggagcggctgaagcacgttatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctgagcttggag
atcgtccccatcatggagctgttggcctccatgaagactcacagtgtcccagaagatatc
aatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcagacgtgcggctgctcaatagtggttggaagc
aacccagagaaagtaaataagatcgtgcggaccctctgcctcttcctcactccggccgag
aggaagtgctcccgtctctgcagggccgactcctccttcaaatacgacacgggcctgttc
gttcagggtctgctcaaggactccaccggcagctttgtcctgcccttccgccaggtgctc
tactcacctttcccgacgacgcacatcgacgtcgacatcaacacggtgaagcagatgcca
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtctgagctcagcgcgctc
tggaagacggacagcgaggaggacatcccaccggacacgatcatccacacggatgaatcc
ttcacgcccgacctgaatatatttcaagacgtcatgcacaaagacactttggtcaagtca
tttatagatgaggtgttcctgctgaagccgggcctctccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggacgaa
acgcagaaaggcaagaagccgtttcggtcgttgcgtaacttgaaggcggacctggacctg
acggtggagggagacctgaacatcgtgatggccttcgccgagaagctgagggcggggctt
cactccttcgtgttcgggaagtccttctacaccagcgtgcaggagagagacgtgctcatg
agcttttga
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