Eumetopias jubatus (Steller sea lion): 114196590
Help
Entry
114196590 CDS
T07240
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114196590 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eju03400
]
114196590 (LIG4)
Enzymes [BR:
eju01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114196590 (LIG4)
DNA repair and recombination proteins [BR:
eju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114196590 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
114196590
NCBI-ProteinID:
XP_027943097
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSRGRAEKIRHFREFLDSWRRFHDALHKNQTDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTPTGPRG
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAVELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAMADTEQIEKAMKHQSFYIETKLDGERMQMHKQGDAYQYFSRNGFNYTD
QFGKSPLEGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHEILKKRYEILTSVFTPVPGRIEMVQKTQAHTQKEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSAFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHRKAPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTTLDDLE
QLRGKASGKLASKHLYIGGDEEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKISNIFE
DVEFCVMSGTDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSSAQTPGEMASVIANLEYRYSWDHSPLSMFRHHIVYLDLYAVINDLSTKIEGTRLAV
TALELRFHGAKVVSRLAQGVSHVIIGEDQSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
HELQEENLYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacagacttcgcaaactgttgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgaatacagagaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacgatgcccttcataagaaccaaacggatgtc
agggactccttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaaactttatatcgaattgcttaatttacct
aaagacggaaaagacgcccttaaacttttaaattatagaacgcccaccgggcctcgtgga
gatgctggagactttgcaacaattgcatattttgtgttgaaaccaagatgcttgcagaaa
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctaataaagaagagtcttcttcagctaataagtcagagttcagcg
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagtgag
cagtctgtattttctgttttccataatgatgctgtcgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttccataggactcagtgacatttccatc
actttattctctgccttcaaaccaatgctggctgctatggcagatactgagcaaatcgag
aaggccatgaaacaccagagtttctacattgaaaccaagctagacggtgagcgtatgcag
atgcacaaacagggggatgcgtatcagtacttctcccgaaatggttttaactatacggat
cagtttggcaaatctcccctggaaggttctctcacaccattcattcacagtgcatttaaa
acagatgtacagatctgtatcctggatggagagatgatggccttcaatcctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgatctg
caaacttgttattgcgtgtttgatgtactgatggttaataataaaaagctgggacatgag
atcctgaaaaagaggtatgaaattcttactagtgtttttacaccagtaccaggtagaata
gaaatggtgcaaaaaacacaagctcatactcagaaagaagtgattgacgctttgaatgaa
gccatagataaaagggaagagggaatcatgataaaacagcctctgtctatttacaagcca
gacaaaagaggcgaaggatggttgaaaattaaaccagagtacgtggatgggctgatggat
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttgtgtgctgtagcagagaagcctcctcctggtgaaaaaccgtcagcgttt
catactctgtgtcgtgttggttcgggttataccatgaaagagctgtacgatctgggtttg
aaattggcccaacattggaagccttttcatagaaaagctccaccaagcagcattttgtgt
ggaacagagaagcctgaggtgtacatcgagccttgtcattctgtcattgttcaagttaag
gccacagagatcgtccccagcgatatgtataaaactggctgcacactgcgttttccacga
atcgagaagataagagaagacaaagagtggcacgaatgcaccaccctggatgacttagaa
cagcttcgtgggaaagcatcgggaaagcttgcgtccaaacacctttacattggtggtgat
gaagaaccacaggagaagaagaggaaggctgccccgaaggtgaagaaagttattggaatt
atcgagcacttaaaagcacccaacctttccaatgtaaacaaaatttctaatatatttgaa
gatgtggagttctgtgtcatgagcggaacagacagccatccgaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacatactgcgtg
attgcagggtctgagaacattagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccgtggcagcct
cgctttatgattcatatgtgcccatcaacaaaggaacattttgcccgtgaatatgactgt
tatggtgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcaggg
attaaaaattccagcgcacaaactcctggagaaatggcttctgtgattgctaatttagag
tatcggtattcctgggaccattcccctctcagtatgtttcgacaccacattgtttatttg
gacttgtatgctgttattaatgacttgagtaccaaaatcgagggaacgagattagctgtt
acagctctggagcttcgatttcatggagccaaagtagtttctcgtttagctcagggagtg
tctcatgtaatcattggggaggatcagagccgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtaactgattcaatagacaag
catgagttgcaggaggaaaatctatatttggtttaa
DBGET
integrated database retrieval system
