Eumetopias jubatus (Steller sea lion): 114219056
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Entry
114219056 CDS
T07240
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114219056 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eju03000
]
114219056 (KDM2B)
04121 Ubiquitin system [BR:
eju04121
]
114219056 (KDM2B)
03036 Chromosome and associated proteins [BR:
eju03036
]
114219056 (KDM2B)
Enzymes [BR:
eju01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
114219056 (KDM2B)
Transcription factors [BR:
eju03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
114219056 (KDM2B)
Ubiquitin system [BR:
eju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114219056 (KDM2B)
Chromosome and associated proteins [BR:
eju03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114219056 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
114219056 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
114219056
NCBI-ProteinID:
XP_027972249
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKPSVDGFSSDSWLEMEEESCDQQPPEEKEEEEEEEEGADKVPKPPADGPPSPTSTP
SEDQEAPGKKPKAPALRFLQRTLSNESEESVKSTTVPTDYPKTPTGSPATGVSAKWTHLT
EFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVPVV
TWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFC
KDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSI
CNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGSL
LKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKTDDVHLRRKRKYE
KPQELSGRKRASTLQTSPGSSSHLPPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRK
KRRSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKARESDHSRSSSPTAGPSTEGAEGP
EEKKKVKIRRKRRLPTKELSKELSKELNQEIQKTENSLANENHQPIKSEPESESEEPKRP
LGLCERPHRFSKGLTGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPP
ISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDL
NHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSAL
CSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITD
ASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLS
FFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgtccgattgaccgccagaggtacgac
gagaacgaggacttgtcggacgtggaggagatcgtcagcgtccgcggcttcagcctggag
gagaagctgcgcagtcagctgtaccagggggacttcgtgcacgccatggagggcaaagat
ttcaactatgaatacgtgcagagagaagctctcagggttcccctgatatttcgagaaaag
gatggactggggattaagatgcctgaccctgatttcacagtccgagatgtcaaactccta
gtgggtagccggcggctggtggatgtgatggatgtgaacacccagaagggcacggagatg
agcatgtcccagtttgtgcggtactacgagacgcccgaggcccagcgggacaagctgtac
aatgtcatcagtcttgagttcagccacaccaagctggagcacctggtcaagcgtccgact
gtggtagatctggtggattgggtggacaacatgtggccccagcatctgaaggagaagcag
acagaagccacgaatgccatcgccgagatgaaatacccgaaagtgaagaagtattgtctg
atgagcgtgaaaggctgtttcactgacttccacatcgactttggaggcacttccgtttgg
taccatgttttccggggtgggaagatcttttggctgattcctccaaccctgcacaacttg
gcactgtacgaggagtgggtgctgtcaggcaaacagagtgacatcttcctgggagaccgc
gtggagcgatgccaaagaattgagctgaaacagggctacacgtttttcatcccttccggt
tggatccatgcagtctacacccctgtagactctctggtatttggaggaaacatcctgcac
agctttaacgtgcccatgcagctgcgtatctacgagatcgaggacagaacacgggtgcag
cccaaatttcgctaccccttctactatgagatgtgctggtatgtcttggaaagatacgtg
tattgtgtgacccagcggtcctacctcactcaggaataccagagagaatcaatgcttatt
gatgcccctagaaaacccagcgtagacggcttctcatctgattcctggctggagatggag
gaggagtcctgtgaccagcagcctccagaggagaaggaggaagaggaggaagaggaggaa
ggtgcagacaaggtgcccaagccacccgccgatggccctccatcgcccaccagcaccccc
tcagaggaccaggaggcccccgggaagaagcccaaagcacctgccctgcggttcctccaa
aggactttgtctaacgagtcggaggaaagtgtgaagtccacgacggtgcccacagactac
cccaagacacccactggctcccctgccacgggggtctccgccaagtggacccacctcacc
gagtttgagctgaagggcctgaaagcgctggtggagaaactggaatccctcccagagaac
aagaagtgtgtccctgagggcatcgaggacccccaggcactcctggagggcgtgaagaat
gtcctgaaggagcatgcggatgatgaccccagtctggccatcactggggtccctgtagtc
acttggccaaagaagactccaaagaaccgggcagtaggtcggcccaaggggaagctgggc
ccggcctcggccgtgaagttggccgccaaccggacgacggcgggagctcgccggcgccgg
acgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgcggagagtgtcacttctgc
aaggacatgaagaagtttgggggccccgggcggatgaagcagagctgcatcatgcggcag
tgcatcgcgcccgtgctgccccacaccgccgtgtgcctggtgtgtggcgaggcagggaag
gaagacacagtggaagaggaagagggaaagtttaacctcatgctcatggagtgctccatc
tgcaatgaaatcatccaccctggatgccttaagattaaggagtcagagggcgtggtcaac
gatgagcttccaaactgctgggagtgtccaaagtgtaaccacgccggcaagaccgggaaa
gcctacaagcaaaagcgtggccctggctttaagtatgcctccaacctgcctggctccctg
ctcaaggagcagaagatgaaccgggacaacaaggaagggcaggagcctgccaagcggagg
agtgagtgtgaggaggcgccgaggcgcaggtcagacgaacaccccaagaaggtgcccccg
gacggcatcctgcgccgaaagacggacgacgtgcacctgagaaggaagcggaaatacgag
aagccccaggagctgagtggacgcaagcgagcctcgacgctgcaaacgtcccccggttcc
tcctctcacctcccgccgaggccccctctaggcagcagcctcagcccctggtggagatcc
agtctcacttacttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaa
aagcggcggtcttggaagaacgccgaggaccggatggctcttgccaacaagcctctccgg
cgcttcaagcaggagccggaggatgacctgcccgaggccccccccaaggcccgggaaagc
gaccactcccgctccagctcccctaccgctgggcccagcacggagggggcagagggccca
gaggagaagaaaaaggtaaagatacgcaggaaaaggcggcttcccaccaaggagctgagc
aaggagctgagcaaggagctaaaccaagagatccagaagacggagaacagcctggccaac
gagaaccaccagcccatcaagtcagagcccgagagtgagagcgaggagcccaagcggccc
ctgggcctctgcgagcgcccccaccgcttcagcaaggggctcaccggcacccctcgggag
ctgcggcatcagctggggcctggcctgcgtagcccaccccgtgtcatctcccggccccct
ccctccgtgtccccgcccaagtgcatccagatggagcgacacgtgattcggccacccccc
atcagccccccgcctgactcgctgcccctggatgacggggcggcccacgtgatgcacagg
gaggtgtggatggccgtcttcagctacctcagccaccaagacttgtgtgtctgcatgcgg
gtctgcaggacctggaaccgctggtgctgcgataagcggttatggacccgcatcgatctg
aaccactgcaagtccatcacacccctgatgctgagtggcatcatccggcgacagcctgtc
tccctggacctcagctggaccaatatctccaagaaacagctgagctggctcatcaaccgg
ttgcctgggctccgagacttggtgctgtcgggctgctcgtggatcgcggtctccgcactc
tgtagctccagctgtccgctgctccgaaccctggatgtccagtgggtggaaggactgaag
gacgcccagatgcgggatctcctgtccccacccacagacaacaggccaggtcagatggac
aatcggagcaagctccggaacattgtggagctgcgtctagcaggcctggacatcacggac
gcctccctgcggctcatcatacgccacatgcccctgctctccaagctccaccttagttac
tgtaaccatgttactgaccagtccatcaacctgctcactgctgtgggcaccaccacccga
gactccttaaccgaaatcaacctatcagactgcaataaggttactgaccagtgcctgtcc
ttcttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaggtgacc
aaggaaggctgtgagcagttcatagctgaaatgtctgtgagtgtccagtttgggcaagtg
gaagaaaaactcctgcagaaactgagttag
DBGET
integrated database retrieval system
