Escherichia coli KO11FL: KO11_19220
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Entry
KO11_19220 CDS
T02104
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ekf
Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ekf03009
]
KO11_19220 (rumB)
Enzymes [BR:
ekf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
KO11_19220 (rumB)
Ribosome biogenesis [BR:
ekf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KO11_19220 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AFH18811
LinkDB
All DBs
Position
complement(4080220..4081347)
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDVRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgattttccg
gttgaggaatggtgcgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgcgacggcaca
ccagaagacctttgtgactgcccgctttatcctgcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgtgcggggctgacaccctacaacgtggcgcgtaagcgtggc
gaactgaaatacattctgctgactgaaagccagagcgatggcggcatgatgctgcgcttt
gtactgcgttctgaaaccaaactggcacaactgcgtaaggcgctgccgtggttacaggaa
caactaccgcaactgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctaccttactgaacaacaggcgctggcagagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgctaccgcgcgcgactgggtacggcagctgccagttaaacatatgtgggatctg
ttctgcggtgtgggtggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcatcagaggccattgcctgtgcaaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactccactcagtttgccaccgctcagggggaggtg
ccggagctggtgctggttaatccgccgcgccgcggcattggtaaaccgctatgtgattat
ctctcaacaatggcaccgcgttttattatctactccagctgtaacgcccaaaccatggcg
aaagatgtccgcgaactgccaggttaccgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacgctgctggtgaagcaataa
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