KEGG   Eutypa lata: UCREL1_6348
Entry
UCREL1_6348       CDS       T03103                                 
Name
(GenBank) putative lsm domain-containing protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
ela  Eutypa lata
Pathway
ela03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ela00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCREL1_6348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ela03019]
    UCREL1_6348
   03041 Spliceosome [BR:ela03041]
    UCREL1_6348
   03032 DNA replication proteins [BR:ela03032]
    UCREL1_6348
Messenger RNA biogenesis [BR:ela03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     UCREL1_6348
Spliceosome [BR:ela03041]
 Complex A
  U1 snRNP components
   Sm proteins
    UCREL1_6348
  U2 snRNP components
    UCREL1_6348
 Complex B
  U1 snRNP components
    UCREL1_6348
  U4/U6.U5 tri-snRNP components
    UCREL1_6348
 Complex C
  U2 snRNP components
    UCREL1_6348
DNA replication proteins [BR:ela03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     UCREL1_6348
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-ProteinID: EMR66666
UniProt: M7TA08
LinkDB
Position
Unknown
AA seq 205 aa
MSTNKQGKMAGYINYRMRVTLMDGRQMTGQMLAFDKHMNLVLSDTEEFRRVKRKQNKPAA
PGASSSNTQTVESEEKRTLGLTIVRGAHIVSLSVESAPPADPSTRLGKSTPGGLPTGLTS
GPGVARPAGRGAAPTSLAGPAAGVGGAAPPFPPQFPGAPGFGPGRGFPPPGNFPPPNFPQ
GAPFPPPGFNPSGGGPPGFNPPPRR
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcgacgaacaaacagggcaaaatggccggttacatcaactaccgaatgagggtcaca
ttgatggacggtcgccaaatgactgggcagatgctagcttttgacaagcatatgaacctc
gttctaagcgataccgaggaattccgacgagtcaagagaaagcaaaacaagccagctgcc
cctggcgcgagctcatccaacacccagaccgtcgagtccgaagagaagcgcactttaggt
ctcacgattgtacgaggtgctcacatagtatccctttccgtcgagtctgccccgcccgcc
gatcctagcacacgtcttggaaagagcacccctggtggtttaccgaccgggttgacatct
ggtcctggtgttgcgcgtccagcaggacgtggagcagctccaacttcacttgctggccca
gctgctggtgtaggaggtgccgctcctcctttcccccctcaattccccggtgcacctgga
ttcggacctggcagaggcttccctccgcccggaaacttcccccctcccaacttccctcaa
ggcgcacctttcccacctcccggtttcaaccccagtggtggcggtcctccgggcttcaac
ccgccgccaagaagatga

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