Eutypa lata: UCREL1_9418
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Entry
UCREL1_9418 CDS
T03103
Name
(GenBank) putative atp-dependent dna ligase domain-containing protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ela
Eutypa lata
Pathway
ela03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UCREL1_9418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ela03400
]
UCREL1_9418
Enzymes [BR:
ela01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
UCREL1_9418
DNA repair and recombination proteins [BR:
ela03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
UCREL1_9418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
GILT
Motif
Other DBs
NCBI-ProteinID:
EMR63660
UniProt:
M7TAJ9
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MVKGRNISVEQKMDGEYCQIHIDISKGSDCIQIFSKSGKDSTNDRASLHGPHSHEHLMII
YYDILMIDDESLLNQRQSTRRRRLENIITCQKGYAEIVKNQVIACRKRTAAAELREVFAR
CITNREEGVVLKPDTPYFDFTTKQEPYACCSIKLKKEYIQGWGDVGDFAVIGARYDAAQA
KAYKIPNLKWTHFYIGCLNNRNQVKAGNELARFTVVNIVEINETLMRTFLTQYSPETMPF
DEQEVFDLELHGVALNKPPAVVFVNPVIFDVRCFSFDKEPNSAGWNAITYDELQEAAKAA
VEMPPQEDSQELRAWIAALEKADPRGIAVDAFNGDPTVPSSGQSDGAMSRTREQSQQTAS
SLPPEPNVATCPHAGHKCALAKWSFLVSPYITTYAWVTESLLKDHGITNYIVDPSKWTKG
KGNTRRARKICLVESKNKGATEAFLKKVEEANLQTRSGKREWIAVYDWRVLEKVTELESL
GSGMGNYDPWRQFYIGIA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagggtcggaatatcagcgttgagcagaagatggatggggaatactgtcagatt
catattgatatcagcaagggctccgattgcatccagattttctccaagagtggcaaggac
agcacgaatgacagggcttctttacacggaccgcatagccacgagcatctgatgatcatt
tactatgacatcttaatgatcgacgatgaatcgctcttgaaccaacgccaatctacgcga
aggagacgtctagagaacatcatcacatgtcagaaaggatatgcggagatcgtaaagaat
caggtcatagcttgtagaaagcggaccgctgctgccgagctccgagaagtttttgccagg
tgtatcacgaaccgggaagagggcgttgtcctcaaaccagacaccccatacttcgacttc
accaccaagcaggagccgtacgcctgctgcagcattaagctaaagaaagagtacattcag
ggatggggagatgttggcgacttcgcagtgattggagctagatacgatgcggcgcaggct
aaagcttacaaaataccgaacctgaagtggactcacttctatattggctgcttgaataac
cgaaaccaggtgaaggcgggaaacgagctggccaggttcacggttgtgaacatagtggag
atcaacgagaccttgatgaggacattcctgacacagtacagcccggagacgatgccgttc
gatgagcaagaagtcttcgacttagaactccatggcgtggcgcttaacaagccgcctgcg
gtcgtcttcgttaatccggttatattcgatgttcgttgcttctctttcgacaaggagccg
aactcggcgggctggaacgctattacatatgacgagctacaggaggcagccaaggcggcg
gttgagatgccgccgcaggaagatagtcaagagctgagagcctggatagccgctttagag
aaggcggaccctaggggcatagcagtggatgcatttaatggagacccgactgtgccctca
tcgggtcaatctgatggtgctatgtctcgaacaagagagcagtctcaacaaacggcgtcc
tcactaccaccagagcctaacgtcgcaacttgcccccacgcagggcataagtgcgccctt
gcgaaatggtccttcctggtatcaccctacattactacctatgcatgggtgaccgagagc
cttctcaaggaccacggcatcacgaactacatcgtcgacccctcgaaatggaccaaggga
aaggggaatacccggcgagcgcgcaagatctgtctcgtcgagtccaagaacaagggagcg
acggaggccttcctcaagaaggtcgaagaggccaacctccagacacggagcggtaagagg
gagtggattgccgtgtacgattggagggttctggagaaggtcactgagctggagtcgctg
ggaagcggcatggggaactatgatccgtggaggcagttttacattggtattgcatga
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integrated database retrieval system
