Enterococcus lactis: I4Q40_05575
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Entry
I4Q40_05575 CDS
T07069
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
elac
Enterococcus lactis
Pathway
elac03030
DNA replication
elac03410
Base excision repair
elac03420
Nucleotide excision repair
elac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I4Q40_05575 (ligA)
03410 Base excision repair
I4Q40_05575 (ligA)
03420 Nucleotide excision repair
I4Q40_05575 (ligA)
03430 Mismatch repair
I4Q40_05575 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elac03032
]
I4Q40_05575 (ligA)
03400 DNA repair and recombination proteins [BR:
elac03400
]
I4Q40_05575 (ligA)
Enzymes [BR:
elac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
I4Q40_05575 (ligA)
DNA replication proteins [BR:
elac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I4Q40_05575 (ligA)
DNA repair and recombination proteins [BR:
elac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
I4Q40_05575 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I4Q40_05575 (ligA)
MMR (mismatch excision repair)
DNA ligase
I4Q40_05575 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I4Q40_05575 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Nlig-Ia
Zn_ribbon_NUD
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
QPL61113
LinkDB
All DBs
Position
1171887..1173923
Genome browser
AA seq
678 aa
AA seq
DB search
MEHEMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLIT
SDSPTQRVGGKVLEGFEKVTHDIPLYSLNDVFSKEELIAFDQRVQKAVGRVVDYCCELKI
DGLSVSLRYEDGNFVRGATRGDGTVGENITENLKTVRSVPIKLKEPMNIEVRGECFMPKR
SFVQLNQDREAEGKDIFANPRNAAAGSLRQLDSKITAKRNLDTFLYTVADFGPMEAKTQY
DALEELEKIGFHTNREKRLCHSIDEVWAYIEEYHDKRVDLPYEIDGIVIKVNEFSLQDQL
GFTVKAPRWATAYKFPPEEVETLIENIEWTVGRTGVVTPTAIMTPVRVAGTTVSRASLHN
GDYIKLKDIRLKDTVLIYKAGDIIPEVSQVVLDKRPKDSEEYQLPTHCPVCGSELVHLDE
EVALRCINPKCPAQMKEGLNHFVSRNAMNIDGLGPRVLEQMYDKKLVADVADLYKLTEEE
LLTLDKIKEKSANNILTAIDNSKDNSVERLIFGLGIRHVGAKAAKILAEHFGDLETLSRS
DYESIIALDTIGDIIADSVVTYFSNEEVHELMNELKQAGVNFEYKGLRSTQLQEVESPFK
EKTVVLTGKLTRLTREEAKETIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAQELGIEV
WTEDQMAEALAKSHSAKE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgaaatgacgattgacgaagctgctaaacgagcagaagaacttcgtacaaga
ttgaaccaatggtctcgcgaatactacgtagaagataaaccaacagtggaagactatgtt
tatgataaagaatacgcagaattagtagcaatcgaagaacaatatcctgatttgatcacg
tcggattctcccactcaacgagtaggcggaaaagtattagaagggtttgaaaaagtcact
catgatattccgctttacagtttgaacgacgttttcagcaaagaagagctgatagctttt
gatcaacgtgtacaaaaagcagtgggacgtgtagtcgattattgctgcgaactaaaaata
gatggtctttccgtctctttgcgttatgaagatgggaatttcgttagaggagcgactcgt
ggggatgggactgtaggagaaaacatcactgaaaacctaaagactgtccgatcagtccca
atcaaattaaaagaaccgatgaacatcgaagtaagaggcgaatgtttcatgccaaaacgt
tcatttgttcaattgaatcaagacagagaagcagagggaaaagatatctttgcgaatcct
cggaatgccgcagccggttccttgcgtcagttagattctaaaatcacagcgaaaagaaac
ctggatactttcttatacacagtagctgatttcggtcctatggaagcaaaaacacagtat
gatgcactagaagagctagaaaaaataggattccacacgaatcgggaaaaacgtctatgt
cattcgattgacgaagtatgggcatacattgaggaatatcatgataaacgtgtagatttg
ccctatgagattgatgggatcgtcatcaaagtgaatgagttctcgctgcaagatcaactt
ggctttactgtcaaagcaccacgatgggcaacagcttataagtttcccccagaagaagtt
gaaacactgatcgaaaacatcgaatggacagtcggacgaacgggggtagtgacgccaacg
gctatcatgacgccggtccgagtagcaggaacgacagtaagccgtgccagtctgcataat
ggggattatatcaagttgaaggatatccgcttgaaagatacagttctgatttataaagcg
ggagatatcattccagaagtttcgcaagtcgtgttggataaacgacctaaagacagcgaa
gaataccaattacctacacattgcccagtttgtggaagtgaacttgtccatttggatgaa
gaagtagcgctacggtgcatcaatcctaaatgccctgctcaaatgaaagaaggcttgaat
cactttgtctcaagaaatgcgatgaatatcgacgggttgggcccacgtgtgcttgaacag
atgtatgacaaaaaactagtcgcagatgttgctgatctttataaattgacagaagaagag
ttattgacgttggacaaaataaaagaaaaatcagcaaataatattttgacagcaattgac
aacagcaaagataattcggtcgagcggttgattttcggattaggaatccgacatgtcgga
gcgaaagcagcaaaaattttagcagaacattttggtgatctagagacattgagtagaagc
gactatgagtcgattattgcgcttgatacgatcggtgatatcattgccgacagtgtagtc
acttattttagtaacgaagaagtccatgaattgatgaatgaattaaaacaagcaggcgtc
aatttcgaatacaaagggcttcgaagtacccaattgcaagaagtcgagtcgccttttaaa
gaaaaaacagtagtccttactggtaaactaacacgattgactcgtgaagaagcaaaagag
acgatcgaaaatcttggcgggaaagtgactggtagcgtatcgaaaaaaacggatatcgtg
gtagcaggagaagatgctggcagcaagctaaccaaagcacaagaattaggaatcgaagtt
tggacagaagatcaaatggcagaagcattggctaaaagccactcagcaaaagaataa
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