Escherichia coli clone D i2: i02_2974
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Entry
i02_2974 CDS
T02004
Symbol
ygaG
Name
(GenBank) S-ribosylhomocysteinase
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
eld
Escherichia coli clone D i2
Pathway
eld00270
Cysteine and methionine metabolism
eld01100
Metabolic pathways
eld01230
Biosynthesis of amino acids
eld02024
Quorum sensing
eld02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
i02_2974 (ygaG)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
i02_2974 (ygaG)
02026 Biofilm formation - Escherichia coli
i02_2974 (ygaG)
Enzymes [BR:
eld01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
i02_2974 (ygaG)
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Motif
Pfam:
LuxS
DUF749
DUF6916
AMG1_II
Motif
Other DBs
NCBI-ProteinID:
AER85519
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Position
complement(2985376..2985891)
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AA seq
171 aa
AA seq
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MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF
AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI
PELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELALPKEKLQELHI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgcagttcgg
gtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttc
tgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacttgttt
gctggttttatgcgtaaccatcttaacggtaatggcgtagagattatcgatatctcgcca
atgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgtc
gctgatgcctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatc
ccggaactgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcag
gatattgcgcgtaacattctggaacgtgacgtgcgcatcaacagcaacgaagaactggcg
ctgccgaaagagaagttgcaggaactgcacatctag
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