Escherichia coli LF82: LF82_2047
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Entry
LF82_2047 CDS
T00854
Symbol
rumB
Name
(GenBank) 23S rRNA
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elf03009
]
LF82_2047 (rumB)
Enzymes [BR:
elf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LF82_2047 (rumB)
Ribosome biogenesis [BR:
elf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LF82_2047 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CAP75327
LinkDB
All DBs
Position
850323..851450
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQPIPEQLSAKTVDLKNLLADFPVEEWCAPMSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgtcgatcttaaaaatctgctcgccgattttccg
gttgaggaatggtgtgcgccgatgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgggatggtaca
ccggaagacctttgtgactgcccgctttatccagcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgtgcggggttaacgccctacaacgtggcgcgtaaacgtggt
gaactgaaatacattctgctgactgaaagccagagcgatggcggcatgatgctgcgtttt
gtactgcgttctgataccaaactggcgcaactgcgtaaggcgctgccgtggttacaggaa
caattaccgcagctgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcactggcagagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgccaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgtggtgtgggtggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcaccagaggccattgcctgtgcgaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactctacgcagtttgccaccgctcagggggaagtg
ccggagctggtgctggttaacccgccgcgccgcggcatcggtaaaccgctgtgtgattat
ctctcaacgatggcaccgcgttttattatctactccagctgtaacgcccaaactatggcg
aaagatatccgcgaactgcctggttatcgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacgctactggtgaagcaataa
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