Erythrobacter litoralis HTCC2594: ELI_07215
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Entry
ELI_07215 CDS
T00315
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli03030
DNA replication
eli03410
Base excision repair
eli03420
Nucleotide excision repair
eli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELI_07215
03410 Base excision repair
ELI_07215
03420 Nucleotide excision repair
ELI_07215
03430 Mismatch repair
ELI_07215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eli03032
]
ELI_07215
03400 DNA repair and recombination proteins [BR:
eli03400
]
ELI_07215
Enzymes [BR:
eli01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ELI_07215
DNA replication proteins [BR:
eli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ELI_07215
DNA repair and recombination proteins [BR:
eli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ELI_07215
NER (nucleotide excision repair)
GGR (global genome repair) factors
ELI_07215
MMR (mismatch excision repair)
DNA ligase
ELI_07215
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ELI_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
ABC63535
UniProt:
Q2N9V6
LinkDB
All DBs
Position
complement(1490451..1492661)
Genome browser
AA seq
736 aa
AA seq
DB search
MTTELENLSEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPH
LVREDSPSRKVGHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAI
AFTAEDKIDGLSCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGA
GGGPLDDSGSAPTPDPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADE
KDNAFDTAKVRQFANPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVV
EQIAAWGVPVSPLFRRCETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFV
AKAPRWAIARKFPAEQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDE
IERLGVRPGDRVVVQRAGDVIPQVVRNLTPDEKRDSFEFPDTCPECGSEAVSEEGGVDVR
CTGGLICPAQRTERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEIL
ALEGWMDKSVDNLLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAE
KARAGDEEAVVALTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSEVSPPRYEVETLDSP
VAGKTVVFTGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKLKKAQDLGI
EVIDEAGWAEIVAAAG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgagcttgaaaatctctccgaagccgaagccgccaatgaattgatgcggttg
gcgcggcaaatcgcgaagcatgataggctctaccacgccgaggatgcgccggagattacc
gaccaggaatacgatgcgctggtgcggcgcaatgcggagctggaagcggcgtttccgcac
ctggtgcgcgaggactcgcccagtcgcaaggtcggccatgcggtcgcggcctcgccgctg
agcaaggtcacccacgaggttcgcatgatgagcctcgacaatgcctttgccgacgaggag
gtggccgagtttgtcgcgcgggtgcggcgctatctcaacattggcgaggacgaggcgatt
gctttcaccgccgaggacaagattgatgggctgtcctgctcgctgcgctacgaaaatggc
aaactcgtgcgcgcggcgacgcggggggacgggcaggtaggcgaggatgtgacgcccaac
gtcgcgcatatcggcgacattccgcaggagcttactcccctcccgcttgcgggaggggct
gggggtgggccactcgacgacagtggctccgcgcccacccctgacccctcccgcaggcgg
gaggggaaatggaacggccccgctgtcttcgagatccgaggcgaggtctatatggccacc
gccgacttccacgcgctcaacgcgcggctgatggacgaggcgcgcgccgaggcagacgag
aaagataacgcgttcgacacggccaaggtccggcagttcgccaatccgcgcaacgcggcg
gcgggctccttgcggcagaaagatgcgagcgtgaccgcgacccgtccgctcaggttctgg
gcgcatggatggggcgcggtcgagggcgatgtgccgggcgaaacgcaggtcgaagtcgtc
gagcagatcgcggcatggggcgtgccggtgtcgccgctgttccggcgctgcgagacgctc
gaggagatgctcgcgcattacgaggccatcggcgcgcagcgggcggacttgccctatgaa
atcgacggcgtcgtctacaaggtcgaccggctcgattaccagcagcggctgggcttcgtc
gccaaggcgccgcgctgggctatcgctcgcaagtttcctgccgaacaggctgaaacgaca
ctcgaaaatattgatattcaggtcgggcggaccggcaagctgaccccggttgggcggctc
gcaccggtgttggtgggcggggtgacggtgaccaatgtcacgctccacaatcgcgacgaa
atcgagcggctcggggtgcgccccggcgaccgcgttgtcgtccagcgcgcgggcgatgtg
attccgcaagtcgtgcgcaatctcacgcccgacgagaaacgcgattctttcgagtttccc
gacacctgtcccgaatgcggcagcgaagcggtgagcgaggaagggggggtcgatgtccgc
tgcactggcggcctcatctgtcccgcgcaacgcactgaaagactgaagcatttcgtcagc
cgcgccgcgctcgatatcgacggactgggcgagaagacgatcgaccagttcttcgcgctc
ggctggctggaaagcccggccgatatcttccgcttgaaggaccggcgcgatgagatcctc
gcgcttgagggttggatggacaagtctgtcgataacctgttggcatctgtggaagcgcgc
cgcgaaccggacaccgcacggctcctgttaggactgggcatccgccatgtcggcgcggta
acggcgcgcgacttgatgaagtatttccacgagttaccggcgcttcgtgaaacggctgag
aaagcgcgggcgggcgacgaagaggccgtcgtcgcactcaccagcatcgacgggatcggc
agcgccgtcgtcgaggcgctgggcgattttttccacgaagagcacaatcgcgcagtgtgg
gacgacctgctcagcgaagtcagcccgccgcgctacgaagtcgagacgctcgacagtccc
gtagccggcaagaccgtcgtcttcaccggcaagctcgagaccatgagccgcgacgaggcc
aaggctcaggccgaacggctcggcgccaaggccagcggcagcgtgagcgccaagaccgac
ttgctggtcgccgggccgggcgcgggcagcaagctcaagaaggcacaggacctcggcatc
gaagtgatcgacgaagctggttgggccgaaatcgtcgcagcggcgggatga
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