KEGG   Elizabethkingia sp. M8: JCR23_04635
Entry
JCR23_04635       CDS       T09429                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
eliz  Elizabethkingia sp. M8
Pathway
eliz01501  beta-Lactam resistance
eliz01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:eliz00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    JCR23_04635
   01503 Cationic antimicrobial peptide (CAMP) resistance
    JCR23_04635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eliz03036]
    JCR23_04635
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:eliz02000]
    JCR23_04635
   01504 Antimicrobial resistance genes [BR:eliz01504]
    JCR23_04635
Chromosome and associated proteins [BR:eliz03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    JCR23_04635
Transporters [BR:eliz02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   JCR23_04635
Antimicrobial resistance genes [BR:eliz01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    JCR23_04635
SSDB
Motif
Pfam: Beta-barrel_RND RND-MFP_C BSH_RND YknX_C Biotin_lipoyl BSH_CusB BSH_CzcB HH_MFP_RND BSH_YknX BSH_LcnD BSH_YhbJ HH_YBHG CzcB_C HH_AprE HH_EMRA
Other DBs
NCBI-ProteinID: QQM27740
LinkDB
Position
1025944..1027032
AA seq 362 aa
MYLKHVIICVVTVLLIASCSKAKDAANKEVKNVPVLKITKKDTLVSNQFVTDIQAKKNVE
IHSRIAGIMQYVSVNEGQFVKQGQRLFKINDAELQMELLKSNASLKQAEADVRIAEVEVK
QIQSLYDKKFVAGNELEMVKAKLSSARAKLAYADAERRTVLQKISFTNIVAPFDGVIDVI
PYKEGSLVENGSLLTTLSQLNEIYAYFSIPENKYFEMLANDKIGAHQKIELMLPNGIKYQ
YNGTLRTAEGEIDKATGSIRYKVSFPNPDHLIKHGTSGKLIISEDQPDAILIPQKSTFSI
QDKTYVFIVDSQNKVKMRNISIGITLRDSYIVDSGLKAGDIIVYEGTQSLRDGESIRVKK
TY
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtatttaaaacatgtaataatctgtgttgttacagtattacttattgcttcatgtagc
aaagccaaagatgcggccaacaaagaagtaaaaaacgtacccgtattaaaaatcaccaaa
aaagacaccttagtaagcaaccagttcgtaaccgatattcaggcaaaaaagaatgtagaa
atacattccagaattgcagggattatgcagtatgtatctgtcaatgaagggcaatttgta
aagcaaggtcagcgacttttcaaaattaatgacgccgaacttcagatggaacttttaaag
tctaacgccagtctgaagcaggcagaagctgatgtccgtattgctgaagtagaagtaaaa
caaattcagagcctttacgataagaaatttgttgccggcaacgaactggaaatggtaaaa
gctaaattgtcttctgcaagagctaaactagcttatgcagatgccgagcgtagaactgtt
ctgcagaaaataagcttcactaatattgtagcacccttcgacggggttatagacgtcatc
ccatacaaagagggaagccttgtagaaaatggttctcttcttacaacattatcccagctt
aatgaaatttatgcttatttctctattcctgaaaataagtatttcgagatgctggctaat
gataaaatcggtgctcatcagaaaattgagctaatgcttccaaacggaattaaataccaa
tacaatggaaccctaagaaccgctgagggcgaaattgacaaagctacaggatctatcaga
tataaagtatcattcccgaacccggatcatctgatcaaacatggtacctccggtaagctt
attatttctgaagaccagccggatgctatacttattcctcaaaaatccacattctccatt
caggataaaacctatgtttttatagtcgattcacagaataaagtcaaaatgaggaatatc
agcatcggtataacgcttagagactcttatattgtagatagcggactaaaagctggtgac
attatcgtttatgaaggtacacagtcgttaagagatggtgaatctatccgcgtaaaaaag
acttattaa

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