Elizabethkingia sp. M8: JCR23_05090
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Entry
JCR23_05090 CDS
T09429
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz01501
beta-Lactam resistance
eliz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JCR23_05090
01503 Cationic antimicrobial peptide (CAMP) resistance
JCR23_05090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eliz03036
]
JCR23_05090
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eliz02000
]
JCR23_05090
01504 Antimicrobial resistance genes [BR:
eliz01504
]
JCR23_05090
Chromosome and associated proteins [BR:
eliz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JCR23_05090
Transporters [BR:
eliz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JCR23_05090
Antimicrobial resistance genes [BR:
eliz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JCR23_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_RND
Beta-barrel_YknX
BSH_CusB
Biotin_lipoyl
BSH_CzcB
BSH_YhbJ
HH_MFP_RND
BSH_YknX
CzcB_C
HH_EMRA
DUF2254
Endonuc-dimeris
Peptidase_M23
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QQM27818
LinkDB
All DBs
Position
1123593..1124669
Genome browser
AA seq
358 aa
AA seq
DB search
MKIGKTLLYILIAAGLLGGGAYIISQNQKETNKQTAIIASSNAEIPVNIVTASFEHVSAD
YSSNGTFAPLQNMQLSSEIGGKVIRVLVKEGDFVHAGQTVATIKKDALEVDHSTAQATYQ
NAVVDNQRYENAYKTGGVTKQQLDQSRLQLKNAKNSLDQAGIKIGDSNVKTLISGYINKK
TVEPGAVVSIGTPLFEIVNVSKLKLQVTVNESEVAKLRVGDQIKIKASVYPDKEFSGRIT
FIAPLADASLNFPIEITVDNNPNNELRAGMYGTAVFSAKETGMQHAYMTLPKNAFVDGVS
NNKVFVVQKDNTVKLTKVVGGRIFGDKIEIISGLNEGDRVVTSGQINLTDGTKISVIK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggtaaaacattactttatattctcatagctgcaggacttttgggaggtgga
gcctatatcattagccaaaatcagaaagaaaccaataagcagacagcaattatcgccagt
agcaatgctgaaattcctgtaaatatagttacagcttcttttgaacatgttagtgcggat
tattcttcaaacggaacatttgcacctttacagaatatgcagctttcttctgaaattgga
ggaaaggtaattcgtgtgttagtaaaagaaggtgactttgtacacgctggacaaactgta
gcaacgattaagaaagatgcactggaagttgatcattctacagctcaggcaacttatcag
aatgcagttgtagacaaccagcgttatgaaaatgcatataaaaccggaggtgtaaccaaa
caacaacttgaccaatccagacttcagctaaaaaatgcaaagaactcattagatcaggca
ggtatcaagattggtgattccaatgtaaaaacattaatcagcggttatattaacaaaaaa
actgttgaaccaggtgctgtagtgtctatcggaactcctctgtttgaaatcgtaaacgta
tctaaactgaagttacaggtaactgttaacgaaagtgaagtagcaaaattaagagtcgga
gatcagatcaaaataaaagccagcgtttatccagataaagaattctcgggtagaattaca
tttattgcgccattagctgatgcttctcttaacttccctatcgaaattacagtagataac
aatccaaataatgagctaagagcaggtatgtatggtacggctgttttttctgctaaggaa
acaggaatgcagcatgcatatatgactcttcctaagaatgcttttgtagacggtgttagc
aacaacaaagtatttgttgtacaaaaagataatactgtaaaacttacaaaagtagtaggc
ggaagaatttttggagataaaatagaaattatcagcggactgaatgaaggagacagagtt
gtaaccagtggtcagatcaaccttaccgacggtactaaaatttcagttattaagtaa
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